Chaetura pelagica (chimney swift): 104398377
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Entry
104398377 CDS
T08631
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C
KO
K20163
DENN domain-containing protein 4
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104398377 (DENND4C)
Membrane trafficking [BR:
cpea04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104398377 (DENND4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
104398377
NCBI-ProteinID:
XP_010006786
LinkDB
All DBs
Position
Unknown
AA seq
1940 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDTDTATLLDQEISRHETKSTGPKAPITDIAVIIKSAGETVP
EGYTCVEATPTALQANLNYGSLKSPELFLCYKRGRDKPPLTDIGVLYEGKERIISGCEVI
QATPYGRCANVNNSSASSQRIFITYRRAPPIRPQNSLAVTDICVIVTSKGETPPHTFCKV
DKNLNCGMWGSSVYLCYKKSVPASNSLAYKAGLIFRYPQENYESFPLSDSVPLFCLPMGA
TIECWDSQTKYPLPVFSTFVLTCSSAEKVYGAAIQFYEPYPRELLTEKQQLQLGLLTAVE
RKVVTSKSINSNKCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNIPF
PSPQRPRILVQLSAHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLEGKI
LLHSLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLATVLSAPLPFIVGVDSRYFDLY
DPPQDIVCIDLDTNMVYISDDKKSTNWKQFPKKPCKSLLSTLRKLHPQLAAVHRKTQEGS
AVEMTPIEADFSWQKKMTELEMEIQEAFLRFMASILKGYRTFLKPITQAPSNKATAADSL
FDHQGFLKSRDRAYTKFYMHLTKTQIFSRFIEECSFVSDKDTGLAFFDDCIEKLFPDKGT
EKGEKVDIDSVEDARLIELDESQKSEHTVFITPPEPPADDAQDRVPKYSYKNFPRLDFKL
FDRPQELKLSFSRHPAGSSISNSPALMAKRTKQEIKTAHKLAKKYYVSPPQWAKCLFSHS
YSLWFICLPAYIRVAHPKAKALQQAYDVLIKMRKTDVEPLDEVCYRVVMQLCGLWGQPVQ
AVRVLFEMKNAGIQPNAITYGYYNKAVLESPWPSSNRSGIFLWTKVRNVVRGTAQFRQCL
KKSAQSPQVPVISALRSTTGGSDGDMVSHGSVDSSNDANSGEHTLFVSDLVRLDSIDNHS
STGGQSDWGYGSKDELLRDYGDSLLATETQVEKEVCTEKSEEKQLLNIGTHSSVDPPAWG
NSIVKVPSGIFDSSGRKISTGSSPLFVPQDSVENVVFGDVSPRKTSEKGQKRQKLFSERS
CSFSSESRAGMLLKKGSLDLHSKEMAIMMGADAKILTAALSGARTSTCHISKSYSFESIV
DQQVSSISGTWSCVTESDWESEHRSSPVLEEPGEGQEHLENGKDENMSTVKNKNVEQSVE
SKIQKPESKDTATKRNSFYAVVKPVEREDVEVGLDPLSLLATDSTQLRHSEPEEKLVSPV
AARNLADEIESYMNLKNPLGSKFPSMELHKPHREAEASGTLGHSQERRSSLPLDPVLPSP
KSYENRRSPSVSRSKTFTGRPKQQTHPRVQKERSSSLTGLGRSSPHGSLGSVVTTLSNLK
LDNILSGPKMDVLKSGMKQAANVASKMWGVVTSAYSYSDDEDEINRPEFNFPAGFEDNIL
GDNLSSRTGVPGLITNELAQSTTSLGSSSSGGDAGRQQYNTGEVAFPRSMKVLDSEKSEH
SSSHNTSLSSIFQNYAMEVLMSSCSQCRACGALVYDEEIMAGWTADDSNLNTTCPFCKST
FLPLLNVEFKDLRGSASFFLKQSTSGDSLQSGTLPVTTDPLEQKLFSSPAVSDLISFSDH
PQSSHIIAEETSSSAEQSDLAEEQSKEPRTMKTSANNPLKRGVSLTRSHSVGGPLQNIDL
SQRPSHGISTVSLPNSLQEVVDPLIKRANPLPVSVPYLSPLVLRKELESLLENEGEQVIH
TSKFINQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNDGVQLPLTSLAQDSKLVYIQL
LWDNINLHQEPGEPLYVAWRNLNSSEKRSSTAAEDQQATNTLLENIKLSIQHNNVVKPIN
LLLQKVKPDVKRQRSFYREILFLSLVSLGRENIDIEVFDSEYRIAHKNLPKDVLGKMQKI
DAPPSSRVECCRKCFGAPLI
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaaggtccacgagtggctgactattttgtagtggcagggctcactgat
acagatactgcaactcttctggaccaagaaataagccgacatgaaacaaagtcaactggt
ccaaaagctccaattactgacattgctgtgataattaaatcagctggtgaaactgtccca
gagggttacacctgtgttgaagccacccctacagcccttcaagccaacttaaactatgga
agtctaaagagtcctgaactatttctttgctacaagagaggccgggacaaaccacctctt
actgacattggagttctatatgaagggaaggaacgcatcatttcaggctgtgaggtgatt
caagctactccttatggtcgttgtgctaatgttaacaacagttcagcttcttctcaacgg
atctttatcacgtatcgaagggctcctccaatacgaccccaaaattcattggcagtgaca
gatatttgtgttattgttaccagcaaaggagaaacccctcctcatacattctgtaaagtc
gataaaaatttaaattgtggtatgtggggttccagtgtgtacctttgttacaagaagtct
gtgccagcttctaactctttagcatataaagctggcttaatctttagatatcctcaagag
aactatgagtcattcccactgtcagactctgtacctcttttctgccttccaatgggagct
actattgagtgctgggactctcaaaccaaatatccactaccagtgttctcaacatttgtg
ctgacctgctcttctgcagaaaaggtttatggtgctgctattcagttttatgagccttat
ccccgggagctgctaacagaaaaacaacaattgcagctgggtctcctgacagctgtagaa
aggaaagtggttacttccaagtccatcaattccaacaaatgcatctgccttctctcacat
tggcctttctttgaagcatttcgaaaatttcttatgttcatctacaaactgtctgtctct
ggacctcatcctcttcccattgaaaagcacatatcccattttatgcacaatatacctttc
ccttcaccacaaaggccaagaattcttgtgcagctttctgcccatgatgcattaatactg
tctcagccagtttctacaccattgccattaagtggagcaaactttagcacactgctcatg
aatcttggaccggaaaactgtgccactctgttactctttgtattactagaaggcaagatc
ctccttcattctcttagaccagctgtgttgacaggagttgctgaagctgtggtagctatg
atatttccatttcagtggcaatgtccatatatccccctctgtcctttgtctctggccacc
gtactcagtgcacctcttccatttattgttggagttgattcacgatactttgacctgtat
gatccaccacaggatattgtgtgcattgacttagacacaaacatggtgtacatatcggat
gataagaagagcaccaactggaagcagtttcctaagaagccgtgtaaaagtctgctcagc
accttaagaaaattacacccacagctggcagcagttcacaggaaaactcaagaaggctct
gcagtggagatgactcctattgaggcagatttctcctggcagaagaagatgacagaactc
gagatggagatccaggaagcttttctgcgtttcatggcatctattttaaagggttacaga
acattcctcaagccaatcacacaggcaccttcaaataaagcaactgctgctgattccttg
tttgatcaccaaggatttttaaaaagcagagatcgtgcctatacaaagttctacatgcat
ctcaccaaaacgcagatattcagccgctttattgaagagtgcagctttgtgagtgacaag
gatactggcttggcattttttgatgactgcatagaaaagctctttccagataaaggaaca
gaaaaaggagagaaggttgatatagattctgtcgaagatgcacggttgattgagcttgat
gagtcacaaaaaagtgaacacacagtgttcataacgccaccagaacctcctgctgatgat
gcacaggatcgagtgccaaaatacagctataaaaacttcccacgactagatttcaagctc
tttgacaggccccaggagctcaaactctccttcagcagacacccagctggaagcagcatt
tcaaatagtccagcactcatggcaaagaggacaaaacaggagataaaaactgcccacaaa
ttagccaagaagtattatgtaagccccccgcagtgggctaagtgtctcttcagtcatagt
tatagcctatggtttatttgtctgccagcctacatcagagttgcccatcccaaggccaaa
gcactgcagcaggcatatgatgttctaattaaaatgaggaaaactgatgtggaaccacta
gatgaggtctgctacagagttgtaatgcagctctgtggactgtggggtcagcctgttcag
gctgtgagggtcctctttgaaatgaagaatgctggaatacagccaaacgccatcacctat
ggttattataataaggcagttttagaatctccttggcctagcagtaaccgcagtggcatt
ttcctgtggacaaaggtacgaaatgtagttcgtggcacagcacaatttaggcagtgctta
aagaaatcagcgcagagcccacaagtccctgtgatatcagctctgcggagtaccacgggt
ggaagtgatggggacatggtgagccatggtagcgtggatagttctaatgatgctaacagt
ggggagcacactctcttcgtcagtgacttagtcaggcttgattccattgataatcactct
agcacaggtggtcagtcagactggggctatggatccaaggatgaacttttaagagattat
ggggatagtcttcttgcaactgaaacacaagtagagaaagaggtttgtacagaaaaatct
gaggaaaagcaactgctgaacataggaactcatagttcagtagacccacctgcttggggt
aacagtattgtgaaagttccatcaggcatttttgatagcagtggacggaaaatcagtact
ggttctagtccactgtttgtacctcaggattcagttgaaaatgtagtctttggtgacgtt
tctcctcggaaaacaagtgaaaaaggacagaagaggcaaaaactgttctcagagagaagc
tgcagtttcagcagtgaaagcagagcaggcatgctgctgaagaaaggcagcttggacttg
cattctaaagaaatggcaataatgatgggagcagatgccaagatcctaacagcagcttta
tctggggccagaacttcaacctgtcatatcagtaaatcttacagctttgaaagtattgtt
gaccaacaggtttctagcataagtggcacttggagttgtgttactgagagcgactgggaa
tcggagcataggtcttcaccagtgctggaagaacctggggaagggcaggaacatcttgag
aatgggaaagatgaaaacatgtccacagtgaaaaacaagaatgttgaacagtcagttgag
tctaaaatccagaaaccagaatccaaagatacagctactaaaaggaatagcttttatgca
gtggttaagcctgttgaaagggaagatgttgaagtaggcttggacccattatctttgcta
gctactgacagcacacaattgaggcactcagaacccgaggaaaagttggtgtcaccagtt
gcagcacgtaatttggccgatgaaatagagagctacatgaatctgaagaacccattgggt
agtaagtttcccagcatggaactgcacaagccacatagggaagcagaagcctctggtaca
cttggtcactcccaagaaaggaggtcaagcctgcctttggatcctgtcctgccatccccc
aagtcttacgaaaatcggagaagtccatctgtctccagatccaaaacattcactgggagg
ccaaagcaacaaacccatccacgagttcaaaaggagcggtcttcatctttgacaggactg
ggtcgttcttctccacatggctccttaggatctgttgtaacaactttatccaatctgaag
ttagacaatatactgtctggaccaaaaatggatgttctgaagtcaggcatgaagcaggct
gcaaatgtggccagtaagatgtggggagttgtaacttcagcatacagttactcagatgat
gaggatgaaatcaatcgaccggagtttaacttccctgctggttttgaagataatatttta
ggagataatctgtcatcaagaactggagtcccagggctgatcacgaatgagcttgcacaa
agcactactagtcttggcagtagcagtagcggtggagatgcaggaagacagcagtataat
acaggtgaagttgcattcccaagaagtatgaaagttctagattctgagaagtcagagcac
agttcttctcataatactagtttatccagcattttccagaactatgcaatggaggtattg
atgtcaagctgctctcaatgtagggcttgtggtgctttggtttatgatgaagaaattatg
gctggatggacagcagatgattcaaacctgaacactacctgtcctttctgcaaaagtacc
ttcctacctttacttaatgttgaatttaaagacctacgtggctctgcaagctttttcctg
aagcaaagtacgtcaggtgatagtttacagagtggtacccttccagtaacaacggatccc
ctggaacagaagctgttttccagtccagctgtttctgacttgatcagtttttcagatcac
ccacagtccagccacattatagctgaagaaactagctcttcagctgagcagagtgatttg
gcagaagaacagagtaaagagcccagaaccatgaagacatctgccaataatccactgaaa
aggggagtgtccttgactcggagccatagtgttggaggtccactgcaaaacattgatctt
tcccagagaccctctcatggaatttcaacagttagtcttccaaatagtttgcaagaagtt
gtggatcccctaataaaaagagctaaccctctccctgtatctgtgccctatttgagccct
ttggtactgcgtaaggagcttgaatcactgttggaaaatgagggagagcaagtaattcat
acatccaaattcatcaatcaacaccccataattttctggaacctagtttggtatttccga
cggctggatctacctagcaacttacctgggctcattctaacgtctgaacactgtaatgat
ggagtacagcttcctttgacatctcttgctcaagatagcaagctagtgtacatccagctt
ctgtgggacaatatcaacctccaccaggagccaggggagcccctgtatgtagcttggagg
aatctcaattcttctgaaaagagatcctccacagctgcagaagatcagcaggcaacaaac
actttgttagagaacatcaaactaagcattcaacacaataatgttgttaaaccaatcaac
ctccttctgcagaaggttaagccagatgtgaaacgacagaggagtttttacagagaaatt
cttttcctttctctggtgtctcttggaagagagaacatcgacattgaggtctttgatagt
gaatacagaattgcacataaaaatctaccaaaggatgttcttggaaagatgcagaaaata
gatgctccaccaagcagcagagttgagtgttgtaggaagtgctttggagcacctttaata
taa
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