Chaetura pelagica (chimney swift): 104398412
Help
Entry
104398412 CDS
T08631
Symbol
NUP54
Name
(RefSeq) nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104398412 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104398412 (NUP54)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104398412 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
104398412
NCBI-ProteinID:
XP_010006824
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MFQLFFPEPTSYLQLMLPCSFSASRSSGFGGLETTNSTASGFNFGGFGLTANPAVNFNIG
NFGVSTTSTPPFNFGNSLASAGAFGGFGTTTTTVAPAFSFSAPTNTGTSGLFGATQNKGF
GFGASFGTGTGTGLGSGLGTGLGFGGFGTQQQQTTLGGGLFSQPAQTPAQSNQLINTASA
LSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSLMPN
NKDEDGLVVLVFNRKEADIRSQQQQLVESLHKILGGNQTLTVNVEGVKTMPDDQTEVIIY
VVERSPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELSPAQVKQLLQNPPAG
VDPIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQK
NQTTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQAEEEQLRVQLDTIQCELNA
PTQFKGRLNELMSQIRMQNHFGAVRAEERYYIDADLLREIKQHLKQQQEGLSHLISIIKD
DLEDIKLIEHGLNESLPIRGGVFS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagcttttctttcctgaacctacctcttacttacaactaatgttaccttgctct
ttttctgcttcccgctcgtcaggatttggtgggcttgaaactacaaactccactgccagt
gggtttaattttgggggtttcggattaactgctaatcctgcagtgaattttaatattggg
aatttcggtgtttctactacctcaactccaccattcaattttggtaacagtctggcaagt
gcaggtgcatttggaggatttgggacaacgaccaccactgtagcaccagcctttagtttt
tctgctcccaccaacacaggcaccagcggactctttggtgctacccagaacaaaggcttt
ggatttggtgctagttttggcacgggaactggaactggcttgggtagtgggttgggaact
gggctaggctttggaggctttggtacccagcagcaacagaccacactaggaggtggcttg
ttcagccagcctgctcagacaccggcccagtcgaaccagctcatcaatacagccagtgcc
ctctcagctcccacgctcttaggggatgagagagatgctattttggcaaaatggaaccag
cttcaggccttctggggaacaggcaaagggtacttcaacaataacattgctccagtggag
ttcacgcaggaaaaccccttttgcaggtttaaggctgtgggttacagtttaatgcccaac
aacaaagatgaagacggcctcgtggtcttggtctttaacagaaaagaagcagatattcga
agccagcagcagcagctcgtggaatcactgcacaaaattctgggaggaaaccagaccctc
actgtcaatgtagaaggggttaaaacaatgccagatgaccagacagaagtgatcatttac
gttgtcgaacgctcacccaacggcacatcgaggagagtccccgcaaccaccctctacgcc
cactttgaacaagccaacataaagtcctccctgcagcagctgggggtcagcctctccatg
gccagaacagagctttccccagcacaagtcaaacagctgctgcagaaccctcctgctggt
gttgatcctattatatgggaacaagccaaagttgataatcctgatcctgacaagcttatt
cctgtaccaatggtgggtttcaaggaactgttgagaagattgaaggtccaagatcagatg
accaaacagcatcaaactcgattagatataatatcagaagatatcagtgagctgcagaaa
aaccaaacaacaactatggcaaagattgcacagtataaaaggaaactgatggcactttct
cacagaacattacaggtgttaataaagcaggagatccagaggaaaagtggctatgcaatt
caagcagaggaagagcagcttcgtgtacagttagacaccattcagtgcgaacttaacgca
cctacgcagttcaagggcagactgaatgagctcatgtcccaaatcaggatgcaaaaccac
tttggagcagtgcgtgctgaagagcgctattacatagatgcagacctcttaagggaaatc
aagcaacatctgaagcagcagcaggagggcctgagtcacctaattagcatcataaaggat
gacttggaggacatcaaacttatagagcatgggctgaacgagagtcttcccatcagagga
ggagtcttcagttga
DBGET
integrated database retrieval system