KEGG   Chaetura pelagica (chimney swift): 104398412
Entry
104398412         CDS       T08631                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin p54
  KO
K14308  nuclear pore complex protein Nup54
Organism
cpea  Chaetura pelagica (chimney swift)
Pathway
cpea03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104398412 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpea03019]
    104398412 (NUP54)
Messenger RNA biogenesis [BR:cpea03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104398412 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 104398412
NCBI-ProteinID: XP_010006824
LinkDB
Position
Unknown
AA seq 564 aa
MFQLFFPEPTSYLQLMLPCSFSASRSSGFGGLETTNSTASGFNFGGFGLTANPAVNFNIG
NFGVSTTSTPPFNFGNSLASAGAFGGFGTTTTTVAPAFSFSAPTNTGTSGLFGATQNKGF
GFGASFGTGTGTGLGSGLGTGLGFGGFGTQQQQTTLGGGLFSQPAQTPAQSNQLINTASA
LSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSLMPN
NKDEDGLVVLVFNRKEADIRSQQQQLVESLHKILGGNQTLTVNVEGVKTMPDDQTEVIIY
VVERSPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELSPAQVKQLLQNPPAG
VDPIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQK
NQTTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQAEEEQLRVQLDTIQCELNA
PTQFKGRLNELMSQIRMQNHFGAVRAEERYYIDADLLREIKQHLKQQQEGLSHLISIIKD
DLEDIKLIEHGLNESLPIRGGVFS
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgtttcagcttttctttcctgaacctacctcttacttacaactaatgttaccttgctct
ttttctgcttcccgctcgtcaggatttggtgggcttgaaactacaaactccactgccagt
gggtttaattttgggggtttcggattaactgctaatcctgcagtgaattttaatattggg
aatttcggtgtttctactacctcaactccaccattcaattttggtaacagtctggcaagt
gcaggtgcatttggaggatttgggacaacgaccaccactgtagcaccagcctttagtttt
tctgctcccaccaacacaggcaccagcggactctttggtgctacccagaacaaaggcttt
ggatttggtgctagttttggcacgggaactggaactggcttgggtagtgggttgggaact
gggctaggctttggaggctttggtacccagcagcaacagaccacactaggaggtggcttg
ttcagccagcctgctcagacaccggcccagtcgaaccagctcatcaatacagccagtgcc
ctctcagctcccacgctcttaggggatgagagagatgctattttggcaaaatggaaccag
cttcaggccttctggggaacaggcaaagggtacttcaacaataacattgctccagtggag
ttcacgcaggaaaaccccttttgcaggtttaaggctgtgggttacagtttaatgcccaac
aacaaagatgaagacggcctcgtggtcttggtctttaacagaaaagaagcagatattcga
agccagcagcagcagctcgtggaatcactgcacaaaattctgggaggaaaccagaccctc
actgtcaatgtagaaggggttaaaacaatgccagatgaccagacagaagtgatcatttac
gttgtcgaacgctcacccaacggcacatcgaggagagtccccgcaaccaccctctacgcc
cactttgaacaagccaacataaagtcctccctgcagcagctgggggtcagcctctccatg
gccagaacagagctttccccagcacaagtcaaacagctgctgcagaaccctcctgctggt
gttgatcctattatatgggaacaagccaaagttgataatcctgatcctgacaagcttatt
cctgtaccaatggtgggtttcaaggaactgttgagaagattgaaggtccaagatcagatg
accaaacagcatcaaactcgattagatataatatcagaagatatcagtgagctgcagaaa
aaccaaacaacaactatggcaaagattgcacagtataaaaggaaactgatggcactttct
cacagaacattacaggtgttaataaagcaggagatccagaggaaaagtggctatgcaatt
caagcagaggaagagcagcttcgtgtacagttagacaccattcagtgcgaacttaacgca
cctacgcagttcaagggcagactgaatgagctcatgtcccaaatcaggatgcaaaaccac
tttggagcagtgcgtgctgaagagcgctattacatagatgcagacctcttaagggaaatc
aagcaacatctgaagcagcagcaggagggcctgagtcacctaattagcatcataaaggat
gacttggaggacatcaaacttatagagcatgggctgaacgagagtcttcccatcagagga
ggagtcttcagttga

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