Chaetura pelagica (chimney swift): 104398434
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Entry
104398434 CDS
T08631
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104398434 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpea03021
]
104398434 (SMARCC1)
03036 Chromosome and associated proteins [BR:
cpea03036
]
104398434 (SMARCC1)
Transcription machinery [BR:
cpea03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104398434 (SMARCC1)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104398434 (SMARCC1)
PBAF complex
104398434 (SMARCC1)
GBAF(ncBAF) complex
104398434 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
BRCT_2
DUF919
Chromo
SpeFL
Motif
Other DBs
NCBI-GeneID:
104398434
NCBI-ProteinID:
XP_010006845
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPT
IYLIPDIELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSMDDDEWLRPVMKKDKQV
LVHWGFFPDSYDTWVHANEVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDE
NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAA
LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE
QDEETVATGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLE
QWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQIPAAQQMLSFPEKNK
EKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEP
EKIDGAEEEKMETETDGQQSEKVESKAESEIEEGDKVQEGENERNPEKEQDSEVAADPKP
EEKEAEENKENVDASKDKENEAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEER
KIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYA
ELRARQQMEQQHSQNPQQPHQHPGGPGITPLGAPAHPGLLPHQQPPPYPMMHHQMPPPHP
PQPGQMPGPGSMIPGQPMPGRMMPSVSANIHPASGGPPPPGMSPMSGNLIGPRVPLAAPN
GMYPPPAQPPPPAEGVTPPPAGAPPASAAP
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagctggaggtacattatgtcacattcttggtgctgcttacaaatacaag
aatgaacagggctggcggaggtttgacctgcagaatccgtcccggatggatcgaaacgtg
gagatgttcatgaacattgagaaaacactagtgcagaacaactgtctgagcagaccaacc
atctacctcattccagatatagagctgaagttggccaataaactgaaggatattgtcaaa
cgtcaccagggaacagtaactgaagagaaatcaaaggctacacaccatgtttatccaagt
cctacctcaatggatgatgatgaatggttgagacctgtgatgaagaaagacaagcaggtg
ctggtacactggggcttttttccagacagctacgacacttgggttcacgccaacgaagta
gatgctgaaattgaggatcctcccattcctgagaagccctggaaggttcatgccaagtgg
attttggacacagatgtgttcaatgaatggatgaatgaggaggactatgaggtagatgag
aacaggaaatcagtgagttttcgacagagaatctccatgaagaatgaagagcccgtgcgg
agcccggagaggagagacaggaaagcagcagcaagcacaaggaagaggaagcattctcct
tctccaccccccactcctgtggagtctagaaagaagacagggaagaaaggacaagcagcc
ttatatgggaaaagaagagggcagaaagaagaagatgagcaggaagatcttacaaaggac
atggaggatcccacaccagtacctaatatagaagaagtggtacttcccaaaaatgtgaac
ccaaagaaagacagtgagaacacgcctgtcaaaggaggaactgtggcagaccttgatgaa
caggatgaggagactgtggcaactggaggaaaggaagatgaagatcccaacaaaggtgat
cagagtcggtcaattgatccaggtgaagataatgtcacagaacaaaccaaccacatcatt
attcccagctacgcatcttggtttgactacaactgcattcatgtgattgaacgtcgtgct
cttcctgaattcttcaatggaaaaaataagtccaagactccagaaatatacctggcttac
cgcaacttcatgattgacacctaccgcctgaacccgcaggagtacctgaccagcactgcc
tgcaggaggaacctgactggggacgtgtgtgctgtcatgagagtacatgcttttctggag
cagtggggtctcattaactaccaggtggatccagaaagtcgccccatggccatgggacct
ccccctaccccccacttcaacgtcctggctgacaccccctcggggctcatgcctctccac
atccgcactccgcagattccagctgctcagcagatgctgagttttcctgagaaaaacaaa
gagaagcctactgacctgcagaactttggccttcgcacggacatttactcaaagaagact
ttagcaaagagtaaaggtgcaagtgctggaagagaatggacggaacaagagactctgctg
ctcttagaggctctggagatgtacaaagatgactggaacaaagtctcggagcacgtcggg
agccgcacccaggacgagtgcattctccatttcctgaggctccccattgaagacccttac
ttggagaactcagatgcatctctgggccccctggcttaccagcctgtgcctttcagccag
tctggcaaccccgtgatgagcactgttgccttcctggcctcggtggtggatccccgggtg
gcatcagctgcagcaaaggctgccttagaggagttctctcgagtccgagaagaggtgccc
ctggagctggtggaagctcatgtcaagaaagtacaggaagcagcaagagcctctgggaag
gtggatccaacgtatggattagagagcagctgcattgctggaacaggcccggatgagcca
gagaaaatcgatggagctgaagaagaaaaaatggaaacagagacagatgggcagcagtct
gagaaggttgagagcaaagcagagagtgaaattgaagaaggtgataaagtacaagaagga
gaaaatgagagaaatccagaaaaagagcaagacagtgaagtggcagcagaccccaaacca
gaagaaaaggaggcagaagagaacaaggagaacgttgatgcaagcaaagacaaagagaat
gaggctggaaagaagaaagtggaacatgaaatctcggaaggaaacgtcgctacagctgca
gctgctgccctggcctcagctgccaccaaagcaaagcacctggcagcagtggaagaaaga
aagatcaagtccctggttgcccttctggtggaaacacagatgaagaagctggagataaaa
cttcgccattttgaggagctggaaaccattatggacagagagaaggaggcactggagcag
cagaggcagcagcttctgaccgaacgccagaactttcacatggagcagctgaaatacgcg
gagctgagggcgcggcagcaaatggagcagcagcacagccagaacccccagcagcctcac
cagcaccccggggggcctggcatcacccccctgggggcaccagcacatccaggcttactg
ccccaccagcagcccccgccctaccccatgatgcaccaccagatgccaccgcctcacccg
ccgcagcccggtcagatgccaggacctggctccatgatccctggacaacccatgccaggc
cggatgatgccaagtgtgtcagccaacatccatccagccagtggtggtccccccccacct
ggcatgtcccccatgtcagggaatctcattggacctcgtgttcctctcgcagctcccaac
ggcatgtatccccctccggcccagccgcccccaccagcagaaggggtgaccccccctcca
gcaggagccccgccggcctcggccgctccctaa
DBGET
integrated database retrieval system
