Chaetura pelagica (chimney swift): 104398599
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Entry
104398599 CDS
T08631
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04068
FoxO signaling pathway
cpea04110
Cell cycle
cpea04120
Ubiquitin mediated proteolysis
cpea04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104398599 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
104398599 (SKP2)
04150 mTOR signaling pathway
104398599 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104398599 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104398599 (SKP2)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104398599 (SKP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_6
F-box_5
Ycf54
Zn_ribbon_IFT122_C
Motif
Other DBs
NCBI-GeneID:
104398599
NCBI-ProteinID:
XP_010007032
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MGVSVLKKDKLGNENTPQDLLVSSSCPPQKRQKVKEKEKEKDFFIVRRPRLLREAESGVS
WDALPDELLLAIFSYLPLSDLLRVSLVCKRWHRLSFDESLWQTLDLTGRNLLPGVIGQLL
PAGVTVFRCPRSCVGNPLFKTSKPLRVQHMDLSNCTVSVADLQSILCLCERLQNLSLEGL
VLSDDIMKSIAKNPSLIRLNLCGCSGFSAEALELMLSSCSLLEELNLSWCDFTATHVKAA
VSHITSKVTQLNLSGYRQNLQIPDVKTLVERCPLLVHLDLSDSVMLKPECFQYFHQLIFL
QHLCLSRCYQISPAALVELGEIPTLKTLQVFGIVTDSSLQLLKEALPDMKINCSHFTSIA
RPTIGSKKNHEIWGIKCRLTLRNPSGL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgtctgtccttaagaaggacaagctgggcaatgagaacacaccacaggacctg
ctggtgtcatcgtcctgccctcctcagaagcggcagaaggtgaaggagaaggagaaggaa
aaggactttttcatagtgcgccggcctcggctgctccgagaggcagagtcaggtgtttca
tgggatgcacttccagatgaattgcttttggcaatcttttcatatttgcccctaagtgac
ttgctcagagtttccctggtttgtaagagatggcatcgtctttcgtttgatgaatctctc
tggcagactcttgatctgacaggtagaaatctgctaccaggagtgattggacagttgctg
cctgcaggtgttactgtattccgctgcccaagatcgtgtgttgggaatccattgtttaaa
acaagcaaacctctgagagtgcaacatatggatttgtcaaactgcacggtgtctgttgcc
gatctccagagtattctttgtctgtgtgaaaggctgcagaacctcagcctagagggacta
gttctttctgatgacatcatgaagagcattgctaagaatcccagtttgattcgactaaat
ctctgtgggtgctcaggattttctgcagaagccttggagctgatgttgagcagctgttct
ttgttggaggagctgaacttgtcctggtgtgacttcacagccactcatgtcaaagcagcc
gtcagtcatattacatcaaaagtaacccaattaaatttaagtggatacagacagaatcta
caaataccagacgtcaaaacactggtggaaagatgtcctttgctcgtccatttagatcta
agtgacagtgtgatgttgaagcctgagtgctttcagtattttcaccagctcatctttctg
caacatctgtgtcttagccgatgttatcagatatcaccagcagccttagtagaacttggt
gaaattccaacattaaagactcttcaggtatttggaatagtgactgatagctccctacag
ctcctcaaggaggcgcttcctgacatgaagatcaattgttcacattttacaagtattgca
aggccaactattgggagcaaaaagaatcatgagatttggggcatcaaatgcagattaaca
ctgagaaatcctagtggcttatga
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