Chaetura pelagica (chimney swift): 104398699
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Entry
104398699 CDS
T08631
Symbol
SLC6A1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104398699 (SLC6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpea02000
]
104398699 (SLC6A1)
Transporters [BR:
cpea02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104398699 (SLC6A1)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104398699
NCBI-ProteinID:
XP_010007139
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MATNGTKVADGQISTEVDASITNDKPKTLVVKVQKKKTDLPDRDTWKGKFDFLMSCVGYA
IGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAPM
FKGVGLAAAVLSFWLNIYYIVIISWALYYLYNSFTTTLPWKHCENPWNTDRCFSNYTLAN
TTNMTSAVVEFWERNMHQMTDGLEKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVVY
FSATYPYVMLLILFFRGVTLPGAKEGILFYITPNFSKLSDSEVWLDAATQIFFSYGLGLG
SLIALGSYNPFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMANVTKRPIADVAASGP
GLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPKLLRNRRE
LFIAVVCIVSYVIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECISISWCYGVNRFY
DNIQEMVGYRPCIWWKLCWSFFTPIIVAGVFLFSAVQMTPLTMGSYVFPKWGQGVGWFMA
LSSMVLIPGYMAYMFLTLKGSLKQRIQVMIQPSEDITHPENGPDQAQQSNSANKEAYI
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaacgggaccaaggtggccgacgggcagatctccaccgaggtggatgcctcc
atcaccaatgacaagcccaaaaccttggtagtaaaagtgcagaagaagaagacggacctt
ccagacagagacacctggaaaggaaaatttgactttcttatgtcctgtgtaggttatgcc
attggcttagggaacgtgtggagatttccatacctctgtggcaagaatggtggaggtgca
tttctgattccctatttccttactttaatttttgctggagtgccactgtttcttctggag
tgttcccttggtcagtacacatctataggaggccttggagtgtggaagcttgctccaatg
ttcaaaggtgtgggattagctgctgctgtcctttccttttggctaaatatttactacatt
gtaattatttcgtgggccctatactacctgtataattcctttacaactactcttccttgg
aaacactgtgagaacccctggaacaccgaccgctgcttctccaactacaccttggccaac
accaccaacatgaccagtgccgtggtcgaattctgggaacgcaacatgcaccaaatgact
gatgggttggagaagccggggcaaatccgatggccactggcaattactctagcaattgcc
tggattctggtgtacttctgtatctggaagggggtaggctggactggaaaggtggtgtat
ttctctgctacttacccctatgttatgctgcttatcttgttcttccgtggtgtcacactg
cctggagcaaaggaaggcattttattctatataactcccaacttcagtaagctttcagac
tctgaggtttggctggatgctgccacacagattttcttctcctatggtttgggtcttggt
tcactgattgccctgggaagttacaaccctttccacaataatgtttacagggactccatc
atagtgtgctgcataaactcatgcacaagcatgtttgctggcttcgtcatcttctccatt
gttggattcatggctaatgtcacaaagaggcctattgcagatgttgcagcatcaggccct
ggactggcatttctagcttatccagaagcagtgacacagttgccaatttctcctttgtgg
gcaatactgttcttctccatgttgcttatgctcggaattgacagtcagttctgcactgtg
gaaggcttcatcacagccctggtggatgagttccccaagctcctgcgcaaccggagagag
ctcttcatcgctgtcgtgtgcatcgtctcctacgtgatagggctgtccaacatcactcag
ggtggaatctatgtgtttaagctttttgactactactctgccagtggaatgagtctcttg
ttccttgtgttctttgagtgcatctctatatcctggtgctatggtgttaatagattttat
gacaacatccaggagatggtgggatacagaccctgcatctggtggaaactctgctggtcg
tttttcactcctatcattgtggcaggggtgttcctcttcagtgctgtccaaatgactcca
ctcacgatgggaagttacgttttcccaaagtggggccaaggggttggctggttcatggct
ttgtcttccatggtgctgattccaggctacatggcatatatgtttctaaccctgaaaggc
tccttaaaacagcgcatccaagtcatgattcagccaagtgaagacatcactcaccctgaa
aacgggccagaccaggcccaacagagcaactctgcaaacaaagaagcctacatctaa
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