Chaetura pelagica (chimney swift): 104398840
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Entry
104398840 CDS
T08631
Symbol
TBC1D9
Name
(RefSeq) TBC1 domain family member 9
KO
K19951
TBC1 domain family member 8/9
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104398840 (TBC1D9)
Membrane trafficking [BR:
cpea04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104398840 (TBC1D9)
Endosome - Golgi transport
Rab GTPases and associated proteins
104398840 (TBC1D9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
104398840
NCBI-ProteinID:
XP_010007295
LinkDB
All DBs
Position
Unknown
AA seq
1294 aa
AA seq
DB search
MPGVPAHVRPVVVIVRFGVFCPASEAGSKGVRAGGKGREGDTGLQPRRLRGERLKKRVIK
GGGPFLEGGGRGLLVGTLDVVLDSSARVAPYRILYQAPDSLVYWTIACGCSRKEITEHWE
WLEQNLLQTLSIFENENDINTFVRGKIQGIIAEYNKINGIKEDDDTEKFKEAIVKFHKLF
GMPEEEKLVNYYSCSYWKGKVPRQGWVYLSINHLCFYSFLMGREAKLVIRWVDITQLEKN
ATLLFPDMIKVSTRSSEHFFSVFLNITETFKLMEQLANIAMRQLLDNEGFEQDRSLPRLK
KKSPKKVSALKRDLDARAKSERYRALFRLPKDEKLDGHTDCTLWTPFNKMHILGQMFVST
NYICFTSKEENLCSLIIPLREVTIVEKADSSSVLPSPLSISTKNRMTFLFANLKDRDFLV
QRISDFLQQTTSKIYLEKNISGSYISSDDEVFTRSSSLISASPHKSLSSESEGERQFNLN
DNGIPTATQALMTMYRRRSPEEFNPKLAKEFLKEQAWKIHFAEYGQGVCMYRTEKTRDLV
LKGIPESMRGELWLLFSGAINEMATHPGYYEDLVEKSMGKYNLATEEIERDLHRSLPEHP
AFQNEMGIAALRRVLTAYAFRNPNIGYCQAMNIVTSVLLLYAKEEEAFWLLVALCERMLP
DYYNTRVVGALVDQGVFEELARDYVPQLYDCMQDLGVISTISLSWFLTLFLSVMPFESAV
VVVDCFFCEGIKVIFQLALAVLDANVDKLLNCKDDGEAMTVLGRYLDSVTNKDSTLPPIP
HLHSLLSDDVEPYPEVDIFRLIRSSYEKFGSIRADLIEQMRFKQRLKVIQTLEDTTKRNV
VRTIVTETSFTIDELEELYALFKAEHLTSCYWGGNSNAPDRHDPSLPYLEQYRIDFEQFK
GMFALLFPWACGTHSDVLAARLFRLLDENGDLLINFREFVSGLSAACHGDLTEKLKLLYK
MHVLPDPSPEQEEPDSAFEATQYFFEDITPECTHVVGLDSRNKQGVDDGFVTVSLKTDKG
KKTSQENRNYLRMWSQENKSKAKNAKDLPKLNQGQFIELCKTMYNMFSEDPNEQDLYHAT
AAVTSLLLEIGEVGKLFSMQPTKETDGSSNSCSKTIQSELFQKKEHQQYPLGQHKQFQSS
LVTSDEEAIGTDSTLGMQMEDIKLEDSSPRDNGACSSMLISDDDTKDDSSMSSYSVLSAG
SHEEEKLHCEDIGDDTVLVRSNHTTSLRRSTSIDRDWAITFEQFLASLLTEPALVRYFDK
PVSMMARITNAKNIRMMGKPITSASDYEISTMSG
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgccgggggtgccagcccacgtgcggcccgttgtggtaattgtgagatttggtgttttc
tgcccggcttcagaagctgggagcaaaggagtgagggctggagggaaggggagggagggc
gacacagggttgcagcctagacggctgagaggggagcgtctcaaaaaacgagtgataaag
ggaggtggtcccttcttggagggcgggggcagaggtctccttgtgggtactcttgatgtc
gtgttggactccagtgccagagtggccccatatcgaatcctctaccaggcaccagactcc
ttggtctattggactattgcctgtggttgctcaaggaaggaaatcactgaacactgggaa
tggcttgaacagaatttgttgcaaactctttcaatctttgaaaatgagaatgacataaat
acatttgtcagaggaaaaattcagggcatcatcgctgagtacaacaaaatcaatggcatc
aaggaggatgacgatacagaaaaatttaaggaagccatagtaaaatttcacaagctgttt
gggatgccagaagaagagaaattggtgaactactactcctgcagctactggaaggggaag
gttccccgtcagggctgggtgtatctcagcattaatcacctttgcttttattctttcctc
atgggcagggaagcaaagttagttatccgctgggtcgatatcactcagcttgagaagaac
gcgacgctgctgttccctgatatgatcaaagtgagcacaaggtcaagtgagcatttcttc
tcggtgttcctcaatatcacagagacatttaaactaatggagcagcttgccaatatagct
atgcgacagcttttggacaacgaaggatttgaacaagacaggtcattacccagactgaaa
aagaaatccccaaaaaaagtgtctgcactgaaacgggatcttgatgccagagcaaagagt
gagcgataccgtgcactgttccgacttcccaaggatgagaaattagatggacacacagac
tgtactctctggactccattcaacaaaatgcatattttgggtcagatgtttgtttctaca
aactacatttgctttactagtaaagaagagaacttgtgcagccttattattcctcttcga
gaggtgacaatagtggagaaggcagacagctccagtgtgttgcccagcccgttatcaatc
agcacgaaaaacagaatgacattcctctttgccaacttgaaagacagagactttcttgta
cagaggatctcagactttctgcaacaaaccacttcaaaaatatacttggaaaagaatatt
tctggaagctatatcagctcagatgatgaggtgtttacaagatccagtagtttaatttct
gccagccctcataaaagcctcagctctgagtcggagggagagcgacagttcaatctcaat
gacaatggcattccaacagcaacccaagctttaatgaccatgtatcggcggaggtcacct
gaggagttcaaccccaagctggctaaagagtttttgaaggaacaggcctggaagattcac
tttgctgaatatggccaaggagtctgcatgtatcgcacagagaaaaccagagaccttgtg
ctgaagggcattccagaaagcatgagaggggaactttggctcctgttctcaggagccatt
aatgaaatggccactcaccctggctattatgaggacctggtggagaagtcgatggggaag
tacaatcttgctacagaagagatagagagggacctgcaccgctccctgccagaacaccct
gcgttccagaatgagatggggattgctgctctaaggagagtcttgacagcttatgctttt
agaaatcctaacataggttattgtcaggctatgaacattgtcacttcagtactcctcctt
tatgcaaaagaggaggaagctttctggttgctggtggctctgtgtgaacgtatgctacct
gactactacaacacaagagttgttggagcactggtggatcaaggtgtctttgaagagttg
gctcgtgactatgttccacagctttatgactgcatgcaggacttgggtgtaatatccacc
atttccctgtcctggttcctcactcttttcctcagtgtaatgccatttgagagtgcagtg
gtggttgtggattgtttcttctgtgaaggaataaaggtgatatttcaattagcgctcgct
gtcctcgatgctaatgtagacaagctgcttaactgtaaagatgatggagaagccatgaca
gtcttgggaaggtacctggacagtgtaactaataaggacagcactctgccacccattcct
catcttcactcactgctcagtgatgatgtagagccttatcctgaggtggatatcttcaga
ctgatcaggtcttcctatgagaaatttggaagtatccgagcagatttaattgaacagatg
aggttcaagcaaaggctgaaagtcattcaaaccctcgaagatactacaaagcgcaacgtg
gtacgaactattgtgacagagacttcttttactatcgatgaactggaggaactgtatgct
cttttcaaggcagagcatctgactagctgctactggggaggaaacagcaacgctcctgac
cggcacgaccccagcctgccttacctggagcagtaccggattgactttgagcagttcaag
gggatgtttgctctcctctttccttgggcatgtggaactcattcagatgtcttagctgca
cgtttgttcaggcttcttgatgaaaatggagacctgctcatcaacttccgtgaattcgtc
tcagggctaagtgcagcatgccatggagatcttacagagaagctgaagctactgtataaa
atgcatgttttgcctgatccatcccctgagcaagaagagccagactctgcttttgaagct
actcagtacttttttgaagacatcacaccagaatgcacacatgttgttggcctagacagc
aggaacaaacaaggagtagatgatgggtttgttacagtgagtctgaaaacagacaaaggc
aagaagacctcacaagagaatcgaaattatctgagaatgtggagccaagagaataaatcc
aaagcaaaaaatgcaaaggacttgcccaaactgaatcagggacagttcattgaactgtgc
aagacaatgtacaatatgttcagtgaggaccccaatgaacaagacctgtaccacgctaca
gctgctgtgacaagtttgcttttggagataggtgaggtgggtaagctcttcagcatgcag
cccacaaaagagacagatggcagcagtaacagctgcagcaagactattcagagcgagctg
tttcagaagaaggagcaccagcagtacccccttggacagcacaagcagttccaaagcagc
ctggtcaccagtgacgaggaggccattggcaccgacagcaccctgggcatgcagatggaa
gacattaagctggaagactcttctcctagagacaatggggcctgttcttccatgctgatt
tccgatgatgatacaaaagatgatagttcgatgtcctcctactcagtactgagtgcaggt
tcccatgaagaagaaaagctgcactgcgaggacattggtgatgacaccgttttggtccgg
agcaaccacacgacgtctctccgtagaagcacgagcatcgacagagactgggccatcacc
tttgaacagtttttagcctcccttttgactgagccggcactggttaggtattttgacaag
cctgtatccatgatggccaggattactaatgctaaaaacataaggatgatgggtaaacca
ataacctcggccagtgactatgaaatctctactatgtcgggataa
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