Chaetura pelagica (chimney swift): 104398843
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Entry
104398843 CDS
T08631
Symbol
USP38
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpea01002
]
104398843 (USP38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104398843 (USP38)
Enzymes [BR:
cpea01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104398843 (USP38)
Peptidases and inhibitors [BR:
cpea01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104398843 (USP38)
Ubiquitin system [BR:
cpea04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104398843 (USP38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
104398843
NCBI-ProteinID:
XP_010007299
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MNYFGSQCLTLYYTDDERVRKVTQFIKLGVCILKSSGNKNTSKLCARLSQLLGDSPQCLP
RGRKLSLAFCQQLVRSIAHFQSQGSREAELRLYVSQVTQVSGLLRSVWKAEPDTLLPSLQ
ELFAVISSADTSFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWL
SWPLAQHVETWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHML
LSFQHSPEAFHLIVPHVVALVHSFKRDGLPSSTAFLMQLTELIHCMIYHYSGFPELYEPI
LEAVKDMPKPSEEKMKLILSQSAWTSQSSSLPSCSSRLSGKSETGKTGLINLGNTCYMNS
VIQALFMATDFRRHVLSLNLNGCNSLMRKLQHLFAFLAHTQREAYAPRIFFEASRPPWFT
PRSQQDCSEYLRFLLDRLHEEERTLKALSSAKTSQSIMSEESQTQEAVHKAQVFAEAPCM
GSEERTLIEKMFGGKLKTTICCLNCRSMSQKEEAFTDLSLAFCPPTFLESVSPKYREHSE
VKDDYMVPANTSSXSNLEVHGGCDTVMNEGTIKDFSTEPNSDSTTNSELNKVQDNRDMSQ
RLVGKTPLSVTDLLNYFLAPEILSGDNKYYCEKCASLQNAEKTMQIIEEPEYLILTLLRF
SYDPKCHIRRKILDNVSLPLVLKLPVKRAACSRAIVSGDCSVGVEISDTGENLAKKLKPS
GADEVTCPQLVPYVLSSVVVHSGVSSESGHYYSYARNVTGSEPSGVCHQSAALSLVSPQD
KLLTEENPCTVVESELDTEMPKEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLFYKKQ
NSTCCFNTSSANGLWVNGDPPLQKDLMDAITKDNKLYLQEQELSARTQALQAASASCSFR
PNGFDDNDPPGSCGPTGGGGGGGFSTIGRLVF
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaactactttggctctcagtgcctcacactttattacactgatgatgaacgtgtgcga
aaagttacccagttcatcaaattaggagtatgcatacttaagtcatctggaaataagaat
acttccaagctctgtgctagactctcccagctgctgggcgactccccgcagtgcctgccc
cgcggcaggaagctttccctcgccttctgccagcagctggtgcgcagcatcgcccacttc
cagagccagggcagccgggaggccgagctgcgcctctacgtctcgcaggtgacgcaggtc
agcgggctgctgcggagcgtatggaaggccgagcccgacaccctgttgccctccctgcag
gagctcttcgccgtcatctcctccgccgatacttcatttgaaccttctgttgcattggca
agccttgtgcagcacataccattacagatgattacagtactcatcaggagccttactaca
gatccaaatgtgaaagatgcaagtatgactcaagctctgtgcagaatgattgattggttg
tcctggcctctggctcagcatgtggaaacatgggtgattgcactgctgaaagggctggct
gcagtccagaagtttaccatcctcattgatgtgacactgctcaagattgaattggtcttt
aatcgactttggtttcctctagtgaggcctggtgcccttgctgtcctttcccacatgtta
cttagttttcagcattctccagaagcctttcatttgattgtcccacatgtggttgctttg
gttcattccttcaaaagagatggcttaccttccagtacagcctttttgatgcagttgact
gagttgatacactgtatgatatatcattactcaggatttccagagctctatgaacccatt
ctggaagctgttaaggatatgcccaaaccctccgaagagaagatgaaattgattctcagt
cagagtgcttggacttctcaatccagttctttgccatcttgttcatctagactttctgga
aaatctgaaactgggaagacaggtctaattaatctaggaaatacttgctacatgaacagt
gttattcaagcacttttcatggctacagatttcagaagacatgttttatctctgaattta
aatggatgtaattcactaatgagaaaattacagcatctttttgcttttttggcccatacc
cagagggaggcatatgctcctagaattttctttgaggcttccagaccaccatggttcacc
cctcgatcccagcaggattgctcagaatatctcagattcctgctagacaggctgcatgaa
gaagagagaaccttgaaagcattgtcttcagcaaagacttctcaaagtataatgagtgaa
gaatcccagacacaagaagctgtccataaagcacaagtatttgctgaagcaccttgcatg
ggaagtgaagaaagaactctgatagagaagatgtttggaggaaaattgaagacaactata
tgctgtttgaactgcagaagtatgtctcagaaggaagaagctttcacagatctctctctg
gctttctgtcctccaacatttttggagagtgttagcccaaaatatagggaacattctgaa
gtgaaagatgattacatggtgccagctaatacttcatctnncagtaatttggaagtacat
ggtggatgtgacacagtaatgaatgaaggaaccataaaggatttttctactgagccaaac
tctgacagtaccacaaattctgaactcaacaaagttcaagataatagggatatgtctcag
aggcttgtaggtaaaacccccctgtcagtcacagacttactgaattatttcctggcacct
gagatcctgagtggagacaataagtattattgtgaaaagtgtgcctctctacagaatgct
gagaaaactatgcaaataattgaggaacctgaatacctcattctcactcttttgagattt
tcttatgatccaaagtgtcatataaggcgcaaaatcttggacaatgtgtctctgcctctt
gttttgaaactgccagtcaaacgagcagcatgctctcgagctatagtttcaggagattgt
tctgttggtgttgagatttctgatactggagaaaatcttgctaaaaaactgaagccctca
ggtgctgatgaagtgacctgcccacaattggtgccctatgtgttaagctctgtcgtggtg
cactctggtgtatcctctgaaagtggacattattattcatatgctagaaatgttactggg
tcagagccttcaggtgtctgccaccagtctgcagctctttctttagtttctcctcaagat
aaattgttgacagaggagaatccttgtactgttgtagaaagtgagctggacactgagatg
ccaaaagaatggtttctcttcaatgacagcagagtgacatttacctcatttcagtcagtc
cagaaaattaccagtagatttccaaaggacactgcttatgttctgttttacaaaaaacaa
aatagtacctgttgcttcaacaccagttcggcaaatggactctgggtaaatggagaccct
cctctacaaaaagatctcatggatgcaattacgaaagataacaaactgtacctgcaggag
caagagcttagtgctcgaacacaagcacttcaagctgcctcagcctcatgctctttccga
cccaatggatttgatgacaatgatccccctggaagttgtggaccgacaggaggaggagga
gggggtgggttcagtaccattggtagattagtcttttga
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