Chaetura pelagica (chimney swift): 104398901
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Entry
104398901 CDS
T08631
Symbol
MED13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpea03021
]
104398901 (MED13)
Transcription machinery [BR:
cpea03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
104398901 (MED13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
104398901
NCBI-ProteinID:
XP_010007359
LinkDB
All DBs
Position
Unknown
AA seq
2179 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLSVWRRDQRPGRRELWIFWWGDDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
SQHQPVYLLSEEHLTLAQQSNSPFQVILSPFGLNGTLTGQSFKLSDSSTKKLIGEWKQFY
PVTSNLKEGSEEKQEEMDWEDDSLAAVEVLVAGVRMVYPACFVLVPQTDIPAPSTVGASH
CSTACLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDAQSAQKWVKFSSVSDGFISDST
SHHGGKIPRKLANQVVDRVWQECNMNRAQNKRKYSATSNGLCDEETADKVASWDFVEATQ
RTNCNCSRHKNLKPRNSGQQGQAPPVGQQQQAAPKHKTNEKQDKGDKPQKRPLTPFHHRV
SISDDVAMEADSASQRLVMAAPDSQVRFSNIRTNDVAKTPQMHNAEMANSPQPPPLSPHP
CDVVDEGVAKAPSTPQSQHFYQMPTPDPLVPTKTMEDRLDGLSQPFPAQFPEVIEPTMYV
GTAVNLEEDEADTTWKYYKVPKKKDVEFLPPQLPNDKLRDDPVIPAGQENVTSVTELMVQ
CRKPLKVSDELVQQYQSKNQYLAAAATEADQEPEIDPYAFVDGDVEFLFPDSKKDRQNIE
RESGKKHKTEDGTSSVTVLSHEGEDAMSLFSPSVKQDAQRIAAHARTASTSLFHETDLVV
SYTDLDNLFNSDEDELTPGSKRTVNGADDKCNCKEAKAGNLDPLSCISTADLHKMYPTPP
SLEQHIMGFSPMNMNNKEYGSMDTTLGGTVLEGNSSSVGAQFRIEVDEGFCSPKPAEIKD
YSYVYKPENCQALVGCSMFAPLKTLPSQCLPPIKLPEECIYRQSWTVGKLDLLPPGPAMP
FIKDGDGSTMDQEYGPAYTPQTHTPFGMPPSSAPPSNGGAGILPSPSTPRFPTPRTPRTP
RTPRGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILS
ESVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNSS
GLFLEDELDILGRNTECGKEAEKRFEALRATSVEHGSGGLKEPEKLPDELILLLQDQCTN
LFSPFGAADQDSIPKVGAVSNLVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKT
TCLHHWSKRNVVDVSMQCSQDILRMLLSLQPILQDAIQKKRTVRSWGVQGPLTWQQFHKM
AGRGSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDVAYVVVCP
ENEALLNGAKSFFRDLTAIYESCRLGQHRPICKLLPDGIMRVGPTASKKLSEKLVTEWFS
QTANANNEAFSKLKLYAQVCRYELGPYLASQPLDNSLLSQTNLVPPSSQVASALPPVTAN
AGNPNTPSSAPAAPTSSTMTVTSNSAMSAAATTANSTLTTTAPSSSSASVGSGIPTNKPS
SFPPFSSINNTTSASLTTQAAPVQNGQTGGQQQQPPLQTAAMSADTTSVPAQPHPEVSES
TMDRDKVGVPTDGDSHAITYPPAIVVYIIDPFTYEKKDENSSSSSLWTLGLLRCFLEMVQ
VLPPNIKNIISVQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTL
TGFGPGLAMETALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYC
LSHDQRWLLASCTDLYGEQLETCIINIDVPNRARRKKGSARRLGLQKLWEWCLGLVQMSS
LPWRVVIGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLV
AMEPQGSFIIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASST
YTTENLDLAFNTNNDGADGMGIFDLLDTGDDLDPDIINILPASPTGSPVHSPGSHYPHGG
DMGKGQGTDRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLF
LKASLHLHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSC
LPVHFVVLNQLYNFIMNML
NT seq
6540 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctgcttcgtgccgaacggggccagcctggaggattgccattccaacctcttc
tgcctggctgatctaactgggattaaatggaagcgatatgtatggcagggcccaacatct
gccccgattctcttcccggtcacggaagaggacccgattttaagcagcttcagtcgctgt
ctgaaggcggatgtgctcagtgtttggcgccgagaccagagacctggacgcagggagctg
tggatattctggtggggtgatgaccccaactttgctgaccttattcatcatgatctctca
gaagaggaagatggtgtttgggaaaatggcctttcctacgagtgtcgcactctgcttttc
aaagctgttcacaacctgctggagaggtgcctgatgaatcggaatttcgtgcgcatcggg
aagtggtttgtgaagccttatgagaaagatgaaaaacctatcaacaaaagcgagcacttg
tcctgctcattcaccttcttcttacatggagacagcaatgtttgcaccagtgtggaaatc
agtcagcatcagcctgtgtacctgctcagtgaagaacacctcactctggcccagcagtcc
aacagccctttccaagttattctgagcccctttggattaaatggcacactcacagggcag
tcctttaagctttctgattcgtccacaaagaagcttattggtgaatggaaacaattctat
cctgttacatctaacctgaaggagggatctgaggagaaacaagaagaaatggattgggag
gatgattctttagctgctgttgaagtccttgttgctggtgtgcgaatggtctacccagcg
tgcttcgtcctggttcctcagacagacatccctgctcctagcactgtaggggcatctcac
tgttccactgcttgcttgggtgtccaccaagtgcctgcttccacaagagatcctgccatg
tcttcagtaactctgactccaccaacatctccagaggaggtccaaacagttgatgctcaa
tctgcccagaaatgggtgaagttttcttcagtttctgatggatttatctctgacagtact
agccatcatggtggcaaaatacccagaaagcttgccaatcaagtggtggacagagtctgg
caggagtgcaacatgaacagagcacagaacaagaggaagtactctgctacatcaaatggc
ttgtgtgatgaagagacagctgacaaggtagcatcctgggattttgttgaagccacacag
aggacaaattgcaattgttcaaggcacaaaaatctcaaaccaagaaattcaggtcaacag
gggcaggcaccacctgtgggccaacaacagcaagcagctccaaagcacaagacaaatgag
aaacaagacaaaggggataagccacagaaacgccctttgactcctttccatcaccgcgtg
tccatcagcgacgatgttgccatggaggcagattcagccagtcagaggctggtgatggct
gcaccagacagtcaagtcaggttttcaaatatccgaactaatgatgtagcaaagactcct
cagatgcataatgctgaaatggcaaattcacctcagccaccaccacttagtcctcacccg
tgtgatgtggttgatgaaggggtcgctaaagctccttctactcctcagagtcaacatttc
taccagatgccaacaccagaccccttggttcccacaaaaacaatggaagacagacttgat
ggcttgtctcagccttttccagctcaatttcctgaagtcatagagcctacaatgtatgtt
ggtactgcagtgaatttggaggaagatgaagctgatactacttggaagtattataaagtt
ccaaagaaaaaggatgtggaattcttaccacctcagcttccaaatgataagttgagagat
gatccagtaatacctgctggacaggaaaacgtaacatcagttacagaattaatggtgcaa
tgtaggaaacccttaaaggtttcagatgaactggtgcaacagtatcagagtaaaaaccaa
tacctagcagcagcagccacagaagctgaccaggaacctgaaattgatccttatgccttt
gttgatggtgatgtggaattcttgtttcctgatagtaaaaaagacaggcagaacattgag
agagaatctgggaaaaaacacaagactgaggatgggacatctagtgttacagttctatcc
catgaaggagaggatgctatgtctttattcagtccttctgtcaagcaagatgcccaacgt
attgctgctcatgctcgcactgcatcaaccagcttgttccatgaaacagacttggtggtc
tcttacactgaccttgacaatctcttcaattctgatgaagatgaactaacacctggatct
aaaagaacagtgaatggtgctgatgacaaatgcaactgcaaagaggcaaaagcaggaaat
ctagacccactctcctgcataagcactgcagatctgcataaaatgtatccaaccccacct
tcattagaacaacacattatgggattttctccaatgaacatgaataataaggaatatggc
agtatggacactacacttggaggaacagtacttgaagggaatagctctagtgtgggagct
cagttcagaattgaagtagatgaaggtttctgcagccccaaacctgctgaaataaaggat
tattcttacgtttataaacctgagaactgccaggctttagtgggttgttccatgtttgca
cccctgaagacacttcccagccagtgtcttcctcccatcaagctgcctgaagaatgcatt
tatcgccagagttggactgtgggcaagttggatctacttcctccaggacctgccatgcca
ttcatcaaagatggtgatggaagcactatggatcaagagtatggccctgcatacacacca
cagactcatactccgtttgggatgccaccaagcagtgcacctcccagtaatggcggagct
ggaattctcccttctccttccacccctcgtttcccaactcctagaacaccaaggactcct
cgaacacctcgtggagctggtggacctgcaagtgcacagggttcagtcaaatacgagaac
tctgatttatactcaccagcttccacgccgtcaacatgtagaccactgaattcagtagag
cctgcaaccgtgccttccatcccagaggcacacagtctgtatgtcaacctcatcctctca
gagtccgtcatgaacctcttcaaagactgcaactttgacagctgctgcatttgtgtttgc
aatatgaacatcaaaggtgctgatgttggagtttacattcctgatccaacacaagaggcc
cagtataggtgtacctgtggtttcagtgctgttatgaatagaaaattcggcaacagttct
ggactgtttcttgaagatgagttggatattctaggacgtaacacggagtgtggcaaagaa
gcagaaaaacgcttcgaagctctcagagctacttctgttgaacatggcagtggaggactg
aaagaacctgagaaactgcctgatgagctaatactgttgctgcaggatcagtgcaccaac
ttgttctcaccctttggagcagcggatcaagattccattcccaaagttggtgcagttagc
aacctggtacgtgtagaagaaagggattgttgcaatgactgctacttagccttggaacat
ggacggcagttcatggacaatatgtcaggagggaaagttgatgaagcacttgtgaaaact
acttgcttgcaccactggtcaaaaagaaatgttgtggatgtgagcatgcagtgttcccag
gacatcctgcgtatgctcctctcgctccagcccattcttcaggatgcgattcagaagaag
agaacagtccggtcctggggtgtccaggggcccctcacctggcagcagttccacaaaatg
gctggcagaggctcttatggaactgatgagtccccggaaccactgccaatcccaacattt
ttgttgggatatgattatgattttctggtgctgtctccatttgctttgccatattgggag
aggctgatgttggaaccttacggatctcaaagagatgttgcttatgttgtggtgtgccct
gaaaatgaggctctgctgaatggagcaaaaagcttcttcagggatctaactgcaatatat
gagtcatgcaggcttggtcagcacaggcctatctgcaagttattgcctgatgggatcatg
agagttggacctactgcttcaaaaaaactttctgagaagttggtcacagaatggttctca
cagacagctaatgccaacaatgaagcattttccaaactcaaactttatgcccaagtttgc
agatacgagctgggtccttatcttgcttctcagcctttggacaattctttactttcccaa
acaaatctggtccctccctccagccaggtggcctctgctctgcccccagtgacagctaat
gctgggaatcccaacactccctcctccgctcctgcagctcccaccagtagtacaatgaca
gtgacatcaaacagtgccatgtctgctgcagccactacagccaactccaccctgacaacc
actgccccctcgtcctcttctgccagcgtaggcagtgggatcccaacaaacaagccttcc
tccttcccgcctttcagcagtatcaacaataccacttctgcctccctgaccactcaggct
gcaccagtccagaatgggcagacaggagggcagcagcaacagccaccactgcaaacagca
gccatgtctgcagacactacttcagtgcctgcacagccccatccagaggtttctgaaagc
actatggatcgtgataaagttggagtccctacagatggagattcccacgctatcacctat
ccacctgcaattgtcgtttacatcattgatccttttacatatgaaaaaaaggatgagaac
agtagctcatctagtttgtggacacttggacttctgcgctgctttttagagatggttcag
gttctgcctcctaacatcaaaaatataatttctgtgcagattgtcccatgtcagtacctt
ctacaacctgtgaaacacgaagaccggcagatttacactcagcatttaaaatctttggcg
ttttcagcttttacccagtgtcggagaccccttccaacttccaccaacgtgaaaacatta
actggctttggcccaggtttagccatggaaactgcccttaagagccctgatagacctgag
tgtattcgactgtacacccctcctttcatactggctcctgtaaaggacaagcaaacagaa
ctaggagaaacttttggagaagctggccagaagtataatgtactttttgtaggctactgt
ttgtctcatgatcagagatggctgctggcatcctgtacagatctctatggagaacagtta
gaaacctgcatcattaatattgatgtaccaaacagagctcgcaggaaaaagggctctgcc
cgcagacttggtcttcagaaactctgggaatggtgcctgggacttgtgcagatgagctct
ttgccatggagagttgtcataggccgtttaggaagaataggacacggggaattaaaagac
tggagttgtttgctgagccgtcgaaaccttcagtccctcagtaagagactcaaagacatg
tgcagaatgtgtgggatctctgctgcagactctcccagcatcctcagtgcttgtttggtg
gcaatggaaccacaggggtccttcattattatgccagattctgtctcgactggctctgtc
tttggacgcagcaccacgttaaacatgcagacatctcagctgaacaccccacaggacacg
tcgtgcactcacatacttgtgtttcccacatctgcatctgtgcaagtagcatcatcaact
tataccactgaaaacttggatctggcctttaacacaaacaatgatggagcagatggaatg
ggaatctttgacttgttagacactggagatgatcttgatcctgatattataaatattctc
cctgcatcccctactggatcccctgtacattctccagggtcccactacccccatggaggt
gatatgggcaagggtcaaggtacagaccgattgctctcaacagaatctcatgatgaagta
acaaatatactgcagcagccactggcccttggttattttgtgtcaactgccaaagcaggt
ccattgcctgactggttttggtcagcctgtcctcaagcacaaaatcagtgtcccttgttt
cttaaggcctctttgcacctccacgtgccttcagtgcaatcagacgagctactccacagt
aaacactcccatccacttgattctaatcaaacttctgatgtgctcaggtttgttctggaa
cagtacaatgcactctcctggctaacctgtgatcctgcaacccaggacagacggtcatgt
ctcccagttcattttgtggtgctgaatcagttgtataactttatcatgaatatgctgtga
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integrated database retrieval system
