Chaetura pelagica (chimney swift): 104398928
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Entry
104398928 CDS
T08631
Symbol
NCOR1
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor corepressor 1
KO
K04650
nuclear receptor co-repressor 1
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
104398928 (NCOR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpea01009
]
104398928 (NCOR1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpea03036
]
104398928 (NCOR1)
Protein phosphatases and associated proteins [BR:
cpea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104398928 (NCOR1)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
104398928 (NCOR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
104398928
NCBI-ProteinID:
XP_010007388
LinkDB
All DBs
Position
Unknown
AA seq
2421 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRYPTHSVQYTFPSTRHQQDTAFGGKHEGPSSPIAGQPCGEDQ
NASPSKLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPERPVSPPPVE
QKHRSIVQIIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKL
ILFFKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEI
RKQREQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFD
AEQRRVKFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERK
NVPDCVLYYYLTKKNENYKALVRRNYGKRRGRNQQQIARPSQEEKVEEKVEEEKADKAEK
KEEEKKDEEEKDEKEESKENTKEKDKSEAASEETEEREQATPRGRKTANSQGRRKGRITR
SMTNEAAQANAAAAAATEEPPPPLPPPPEPSSAEPVETSRWTEEEMEVAKKGLVEHGRNW
AAIAKMVGTKSEAQCKNFYFNYKRRHNLDSLLQQHKQKSSRRPREERDVSQCESVASTVS
AQEDEDIEASNEEENPEDSEGAENSSDTESAPSPTPAEPAKPSEETPPESAASKVTTEAA
AEQEPTMKPAASTSPSLTAPSVSTAESQSQIPEPQVKEEINNEAEEPMEVDSRSHPIEAK
PVITLPVHTKVEPVETEMRLPENIQVKIESDTKERDTEKPKEKSEPEEMDYSLSQQVNTT
RQESHSDNDSSATCSADEEVDGEPDRQGIFSRESKPSLLNPTGSILVSPTIKQGQMDLQQ
LHHRAAVIPPMVSCSPCTVPVGTPVSGYALYQRHIKAMHESALLEEQRQRQEQLDMEYRS
AVSPCGTSKSPNVEWEGKPVAYMPYAEVKRAMEQEAQVQNPAARSASPYRLSPREVNKAS
PQPDMNAARYSVPPVLQPAPHQVITNIPEGVRLPTTRPTRPPPPLIPSSKTSVPSEKPSF
IMGGSISQGTPGTYLTSHSQASYTQETAKPSVGSISLGLQQXSAKSASLPYIKQEEFSPR
SQNSQPEGLLGRAQHESVVRGTTTIQEGSITRGTPTSKVSVETIPSLRGSITQGTPALSQ
PGIAADALLKGTITRLATEDSSPEKCREEASAKGHVIYEGKSGHILSYDTIKNVREGTRS
PRTAHEMSLKRSYDTMEGNIKQGMSMRESPVSAPLEGLICRALPRGSPHAELKERTVLSG
SIMQGTPRATAESFEEGLKYPKQIKRESPPIRTFEGAITKGKPYDGVTTIKEMGRSIHEI
PRQDLLSQESRKTPEMVQTTRPIIEGSISQGTPIKYESNSGQSAIKHNVKSLITGPSKLP
RGMPQLEMVPENVKVVERGKYEDVKTGDAVRSRHTSVVSSGPSVLRSTLHETPKSQLSPG
IYDDTNARRTPVNYQSPMSRSSPMMNRVNEAGISSGKSANHERKNTLTPTQRENVPAKSP
VPGVDPVVTHSPFDPHHRGATPEVYRSHLPPHLDPAMPFHRALDPAAAAYLFQRQLSPTP
GCPSQYQLYAMENTRQTILNDYITSQQMQVNLRPDVTRGLSPREQTLALPYAGARGIIDL
NNMAPTILVPHPGGTSTPPLERITYIPGTQLTFPPRPYNPASMSPGHPTHLAASAAANAE
REREREREKERERERERERERERERERERERITSVAAELYLRPGTEQPGRPGSHGYVRSP
SPSVRSQENILQQRPSIFQGTNGTSVITPLDTAAQLRIMQLTPGAPSITQGLPASRYNTA
ADALAALVDAAASAPQMEVAKAKENKHEGTRIEENMGRRSAVVTEQQQMEQKTLEVEKRP
VQCPYTSANFSAGKSQGQSSSVVYSEAGKEKGPPPKSRYEEELRTRGKTTITAANFIDVI
ITRQIASDKDARDRGSQSSDSSSSLSSHRYEAPGDAIEVISPANSPVPSQEKLQPYQQET
PKPSQAENDPNRQYEGPIHRYRTQQEPPSPQQPPPPSSQAEGMAHVPRTHRLITLADHIC
QIITQDFARNQAASQASLQPPTTTFQNSTPAPTPVSTRAKTSNRYSPESQSQPVLHQRPG
ARVSPENLSDKSRGRPGKSPERSHVSSEPYEPISPPQVPVVHEKQENVLLLSQRTEPTEQ
RTDSRSPGSISYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGGSDSDMATAQPGTEIFNL
PAVTTSGAVSSRGHSFADPASNLGLEDIIRKALMGNFDDKSEEHGVVMSQSIAVAPGSSS
AAVPASNETRREEANPSPNSGGGVSKQKLMGKSNSRKSKSPIPGQGYLGTERPSSVSSVH
SEGDYHRQTPVWAWEDRPSSTGSTQFPYNPLTMRMLSSTPPTSIAPPAISQPSTHQQNRI
WEREPAPLLSAQYETLSDSDD
NT seq
7266 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggctaccctcctaaccaaggagcattcagcacagaacagagtcgttac
cctactcactctgtccagtacaccttccccagcacccggcaccagcaggacacagctttt
ggaggaaagcatgagggaccatcttcgccaattgctggtcagccttgtggggaggaccaa
aatgcttcaccttcaaagctgtcaaaggaagaactgatacagagcatggaccgtgtagat
cgcgaaattgccaaagtcgaacagcaaatccttaaactgaagaaaaagcaacaacaactt
gaagaagaagctgctaagcctccagagccagagagacctgtctccccccctccagtggaa
cagaagcaccgcagtatcgtccagattatttacgatgagaatcggaaaaaggcagaagaa
gctcacaaaatttttgaaggtcttggtccaaaagttgaactgcccctttacaaccagcca
tcagacacgaaggtctaccatgagaacatcaaaacaaaccaggtgatgaggaagaagctc
atactgttctttaaaagaaggaatcatgcaaggaaacaacgggagcagaaaatctgtcag
cgttacgaccagctgatggaggcatgggagaagaaagttgacaggatagaaaataatcca
cgcaggaaagccaaggagagcaaaaccagggaatactatgaaaaacaatttccagaaatc
cggaagcaaagagaacagcaagaacgattccaaagggttggtcaaagaggggctggactt
tcagcaactattgctagaagtgaacatgagatttctgaaatcattgatggactttctgag
caggagaataatgagaaacaaatgcgtcagctctcggtcattcctcccatgatgtttgat
gcagaacaaagacgagtgaagtttattaatatgaatggtctgatggaggatcccatgaaa
gtttataaagacagacagttcatgaatgtctggaccgaccatgagaaagagatttttaag
gaaaagtttgtccaacatcccaagaactttggtctaattgcttcctacctggaaagaaag
aatgttcctgactgtgtattatattattatttgactaagaaaaatgaaaattataaagcc
cttgtgcgaaggaattatggtaaacgcagaggaagaaaccagcaacaaattgctcgtcct
tctcaagaagaaaaggtagaagaaaaagtagaagaggaaaaagcagacaaagcagagaaa
aaagaggaggaaaagaaagatgaggaggaaaaggacgagaaggaagaatctaaagagaac
accaaagaaaaggacaaatctgaagctgcatcagaggaaacagaggagagggagcaggcc
actcctcggggccgaaaaactgccaatagccaaggtcgccgtaagggcaggatcaccaga
tctatgacaaatgaagctgcacaagcaaatgctgctgcagctgcagccactgaagaacca
ccaccacctcttccaccaccaccagaaccttcttctgcagagcctgtggagacatcccgc
tggacagaggaagagatggaagttgctaagaaaggcctggtggaacatggacgaaactgg
gcagcaattgccaaaatggttgggacaaaaagtgaagctcagtgtaaaaacttctacttc
aactataaaaggaggcacaatctggacagcctcctccaacagcacaaacagaagtcatcg
cggaggccccgtgaggagcgagatgtgtcacagtgtgagagtgtggcttcgactgtgtca
gctcaggaggatgaagatattgaggcatctaatgaagaagagaatccagaagacagtgaa
ggtgctgaaaatagttctgatacagaaagtgctccatctccaactccagcagaacctgca
aaaccaagtgaagaaactccccctgagagtgctgcttcaaaagtaaccactgaggctgca
gcagaacaagaacctaccatgaaacctgcagccagcacatctccctccttaacagcccca
agtgtatcaacagctgaaagtcagagtcaaatccctgagccacaggttaaggaagaaata
aataatgaggcagaagagcctatggaggttgacagtagaagccatccaattgaagctaag
cctgtgatcactcttccagtgcataccaaagtagaacctgtagagactgaaatgaggcta
ccagagaatattcaagtgaaaatagagagtgataccaaagagagagatacagagaaaccc
aaggagaagtcagaaccagaggaaatggactatagtctgtcacaacaggttaatacaaca
agacaagaatcccattcagataatgactcgagtgccacctgtagtgctgatgaggaggtt
gatggagaacctgacagacaaggtatcttcagcagggagtcaaagccctccctgttaaat
cccactggatcaatactggtatcacccacgataaagcaagggcagatggacctgcagcag
ctgcaccaccgagctgcagtcataccacctatggtgtcctgcagcccctgcactgttccc
gtgggcaccccggtgagcggctacgcgctctaccagcgacacatcaaagccatgcacgag
tcggcgctgctggaggagcaacgccagaggcaggagcagctggacatggagtatcgaagt
gctgtcagcccttgtggcacttccaagagccccaacgttgagtgggaaggaaaaccagta
gcctacatgccctatgctgaggtcaagcgagcaatggaacaggaagcacaggtgcaaaat
ccagcagcaaggtcagcatcaccatacaggctgtctccaagagaagtcaataaagcctct
ccccagcctgacatgaatgcagctcgctacagtgtccccccagttctccagccagcacct
caccaagtaataacaaatatacctgaaggagttcgcctcccaacaaccagacccaccaga
cctccaccaccactcatcccatcctccaaaacaagtgtgccatcagaaaaaccttccttc
atcatgggaggctccatctcacaaggaacacctggcacttacttaacatcccatagtcaa
gcttcctacacccaagaaactgcaaaaccatcagtgggttctatatctcttggactgcag
cagtaatcagccaaatctgcttcccttccctatatcaaacaagaagaattctctcccaga
agtcaaaattcccaacctgagggtctcttgggcagggcacaacacgaaagtgtggttcga
ggtaccacaacaatacaggagggcagtataacacgaggaactccaaccagtaaagtttct
gttgagaccattccttctttgagaggctccataactcagggtactccagctctgtcccag
cctggcatagcagctgatgcattattgaagggaactatcacccggctggctacagaagac
agcagcccagagaagtgtcgagaggaggcttcagccaaaggccatgttatttatgaaggc
aaaagtgggcatattctatcttatgatactattaaaaatgttcgtgaaggaacaaggagc
ccaagaactgctcatgaaatgagtttaaagagaagttatgatacaatggaagggaatata
aagcaaggaatgtcaatgcgggagtctccagtatctgcaccgctggaaggtttaatatgc
cgtgctctgcctcggggcagcccacatgctgaactaaaagagagaactgtgttgtctggc
tctataatgcaaggcacaccaagagcaacagctgaaagttttgaagaaggcttgaaatac
cctaaacagattaagagagaatcacctcccataaggacgtttgaaggagccattactaag
gggaaaccatatgatggagtcactaccataaaagaaatgggtcgttccatccatgagatc
ccaagacaggatttattaagccaggagagtcgcaaaactcctgaaatggtgcagacgacc
aggccaatcatagaaggctccatatctcagggcacacccataaaatatgaaagcaactct
ggccagtctgccatcaaacacaatgtaaaatctttaatcactggaccaagcaagctaccc
cgtggaatgcctcagctggaaatggtgccagaaaatgtgaaggtggtggagcgaggaaaa
tatgaagatgtgaagaccggggatgcagtacgttcccgtcacacgtcagtagtcagctct
ggtccctctgttctcaggtcaactcttcatgaaactcccaaatcacagctgagccctggg
atttatgatgataccaatgctcggaggacacctgtgaactatcagagtccaatgtccagg
agttcacctatgatgaatagagttaatgaggctggaatatcttctgggaagtcagcaaat
catgaaaggaagaacacacttactccaacacagagggagaacgtgccagcaaaatctcca
gtcccaggggttgatcctgtagtgactcacagtccttttgaccctcatcacagaggagca
actcctgaagtctataggagtcacctccctcctcatttagatcctgctatgccatttcac
agggctctggatcctgctgctgctgcttacctgttccagaggcagctctcacccacccca
ggctgcccaagccagtatcagctctacgcgatggagaacacacgccagacaatcctcaat
gactacattacctcacagcagatgcaagtcaatttacggcctgatgtcaccagggggtta
tctcctagagagcaaactttagctctcccatatgcaggagcacgaggaattattgacttg
aacaatatggctcccactatcttagtgcctcatcctggaggaacaagcacaccacccttg
gagagaatcacatatatccctggtacccagctcaccttccctcccaggccttacaatcct
gcttctatgtcaccaggacaccctacacacctggcagcctctgcagctgcaaatgctgaa
agggaacgggaaagggagagggagaaggaacgggaaagggagagggaacgtgagcgagag
cgggaaagagaacgagaacgggagagggagagaatcacttcagtcgctgctgaactttat
cttcgaccaggtacagagcagcctggcagacctggcagtcatggatacgttcggtcccca
tccccttcagttagaagccaggaaaacatactgcagcaaaggcctagtatttttcaagga
accaatgggacaagtgtaatcacacctttggatactgctgctcagctacgtatcatgcag
ctcacccctggagctccctctattactcaagggttgccagcctcccgttacaacactgct
gctgatgcccttgcagcactggtagatgctgcagcctctgctcctcagatggaagttgcc
aaagcaaaagaaaacaagcacgaaggaaccaggatagaagagaacatgggccgccgctca
gctgtggtgactgagcagcagcagatggaacagaagacactggaggtagaaaagaggcct
gtccagtgcccctatacatctgcaaatttttctgctggcaagtcccagggacagtcttca
tcagtagtctattcagaggctgggaaagagaaaggacctccccctaaatccaggtacgag
gaagagctgagaactcgagggaagaccacgattactgctgctaacttcattgatgtgatc
atcaccagacagattgcttcagacaaggatgcacgagacaggggctcccaaagttcagat
tcttccagtagcttatcctcccaccgctatgaagctcctggagatgccattgaggtgatt
agccctgcaaattcacctgtaccttctcaagaaaagctacagccctatcaacaagagact
cctaaaccaagccaggcagagaatgacccaaacaggcagtatgaggggccaattcaccgc
tacaggacacagcaggaacccccttcaccccagcaaccaccacctccctcttcccaagca
gaagggatggcacatgtgcccaggacccatcgactcatcaccctggctgatcacatctgt
caaattattacacaagactttgctagaaaccaagcagcttctcaggcctctttgcagcct
cccaccactacattccagaattccacccctgctcctacacctgtttctacccgggcaaag
acatcgaatcgctacagccctgaatcccagtcccagcccgtcctccatcagcgcccaggt
gctcgagtgtcacctgaaaatctgtctgacaagtccaggggaagacctggaaaatctcca
gagaggagtcatgtctcttcagagccctatgagccaatctcgccacctcaggtccccgtt
gtacatgagaaacaggaaaatgttcttttgctttcccaaagaactgagcctactgaacag
aggactgactctcgctcgccaggcagtatcagttacctgccttcctttttcaccaaactt
gagaacacttcaccaatggtcaaatccaagaaacaggagatatttcggaagctgaactca
tctggtggaagtgactctgacatggcaactgctcagccagggactgaaatattcaatttg
ccagcagtcactacctcaggtgcagtcagttctaggggtcattcctttgcagatcctgcc
agcaatctgggtctggaagacattattaggaaagcactgatgggaaactttgatgacaag
agtgaggagcacggagttgtcatgtcacaatcgatcgcggtagcgcccggcagctccagt
gctgcagtaccagcaagtaatgagacacgtagggaagaagctaatccatcaccaaattca
ggagggggagtcagcaagcagaagctcatgggcaagtcaaatagtcggaagtctaagtct
ccgattcctgggcagggatatttgggaactgaaagaccttcttctgtctcatctgtccat
tcagaaggggactaccacagacagactccagtgtgggcctgggaagacaggccttcatca
acaggttccacccagttcccgtacaacccgctgaccatgcggatgctgagcagcaccccc
ccgacctccatcgccccgccggccatcagccagcccagcacccaccaacagaacaggata
tgggagagagagcctgcaccactgctttcagcacaatatgagactctgtctgacagtgat
gactga
DBGET
integrated database retrieval system
