Chaetura pelagica (chimney swift): 104398933
Help
Entry
104398933 CDS
T08631
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104398933 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpea02000
]
104398933 (SLC6A4)
Transporters [BR:
cpea02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104398933 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
104398933
NCBI-ProteinID:
XP_010007394
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MEKQATSNETEPLTSKKAVSDCSEGEDCKENRLVRNPKSALRLVEDGNKVHPSQGDKGEG
AQISNGYSGVQSSVPCNGMGEVEDAQGTAPAATTTTTTTTSTTCGAEGQQQLMELEDRET
WSKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYIIMAIFGGIPLFYMELALGQ
YHRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLVSSFTAELPWTSCT
NTWNTGNCTNYFSKDNVTWSPHSISPAEEFYTRQVLQVHRSDGLDDLGGISWQLTLCLLF
IFTIVYFSIWKGVKTSGKVVWVTATFPYIILLILLVRGATLPGAWRGVLYYLKPEWQKLL
ATEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCLTSFVSGFVIFT
VLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTFA
GLEGVITGVLDEFPHVWSKRRELFVLGLIIICFLGSLATLTFGGAYVVKLFEEYATGPAV
LTVVFLEAVAVAWFYGITQFCNDVKEMLGFAPGWYWRVCWVAISPIFLLFVTCSFLSNPP
ELRLFDYNYPYWTTVLGYCIGTSSIICIPIYMVYRLIVTPGTLKERILKSITPETATEIP
FGDIRMNAV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaggcaacaagcaatgagactgagccactgacttccaagaaagcggtctca
gactgtagtgaaggagaagattgtaaggagaacagacttgtcaggaaccctaaatctgcc
ttacgactagtggaggatggcaataaagtccatcccagccaaggagataaaggggaggga
gctcagatctcaaatggttattcaggggttcagagctctgttccctgtaatggaatggga
gaggtggaagatgcccagggcactgccccagcagccacaaccaccaccaccaccaccaca
tctaccacctgtggagcagaaggccagcagcagctgatggagctggaggacagagagacc
tggagtaaaaaaattgactttctactctctgttattggctatgctgtggatctgggaaat
gtgtggagatttccttatatatgctaccaaaatggaggaggagcattcctcatcccttac
attattatggccatctttggagggattcctctcttctatatggaactagcactaggacag
tatcacaggaatgggtgtatttcaatttggagaaaaatatgtcctatattcaaaggaatt
ggctttgccatctgtataatagatctttacgtagcctcctactacaacaccattatggct
tgggccttttactacctcgtatcctccttcacggcggagctgccctggaccagctgcacc
aacacctggaacacgggcaactgcacaaactacttcagcaaggacaatgtcacctggtcc
ccacactccatctctcccgcagaagaattttatacccgccaagttctacaggtgcacagg
tctgatgggctggatgacctggggggcattagctggcaactgaccctctgtctgttgttt
atcttcaccattgtgtacttcagcatctggaaaggggtcaaaacatctggcaaggtggta
tgggtgactgccacattcccttacatcatcctcctcatcctgttagtgagaggtgcaact
ttgcctggtgcctggagaggggtcctctactacttgaaacctgagtggcagaagctcctg
gccactgaggtttgggtggatgcagcagcacagatttttttctcccttgggccaggtttt
ggagtcctattggcttatgccagctacaacaaattccacaacaactgctaccaggatgct
ctggttaccagcaccgtgaactgtttgaccagttttgtgtctggatttgtcattttcact
gtgctgggatacatggctgagatgaggaatgaagatgtttcagaggttgccaaggacact
ggacccagccttctcttcatcacgtatgctgaggccattgcaaacatgcctgcttctacc
ttctttgccatcatctttttcctgatgttactcacactgggactggacagcacatttgca
ggactagaaggagtgattactggagtactggatgaattcccacatgtgtggagcaaacgc
agagaattgtttgtgcttggtctgatcatcatttgctttttggggtcactggcaaccctg
acatttggaggagcttatgtggtaaagctgtttgaagaatatgccacgggtccagctgtc
ctgacagtggtgtttctggaagcagttgctgtggcctggttctatggcatcacccagttt
tgcaatgatgtgaaagaaatgcttggctttgccccaggttggtactggcgagtgtgctgg
gtagcaattagtcccatcttccttctgtttgtcacttgcagcttcctgtccaaccctcct
gagctacggctttttgattataattacccctactggaccacagtcttgggttactgcata
ggaacctcttccatcatctgtattcccatctacatggtttatcggttgatcgtcactcca
ggaacacttaaggagcgtattctgaaaagcattactccagaaacagctacagaaattcct
tttggagacatccgcatgaacgcagtataa
DBGET
integrated database retrieval system
