Chlamydia pecorum P787: CPE3_0008
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Entry
CPE3_0008 CDS
T02853
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
cpec
Chlamydia pecorum P787
Pathway
cpec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CPE3_0008 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpec03400
]
CPE3_0008 (recB)
Enzymes [BR:
cpec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CPE3_0008 (recB)
DNA repair and recombination proteins [BR:
cpec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CPE3_0008 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
AAA_30
AAA_11
DUF7660
DEAD
PDDEXK_1
NPHP3_N
ResIII
PDDEXK_9
HEPN_AbiV
Chordopox_E11
Motif
Other DBs
NCBI-ProteinID:
AGW39366
LinkDB
All DBs
Position
complement(7568..10684)
Genome browser
AA seq
1038 aa
AA seq
DB search
MEAFNIFDPLTSIQGKFFLEASAGTGKTFTIEHIILRALLEDTLSHPDKVLAVTFTNAAT
NELKQRIHATLRSCLETLSHFDITHKDLPPYLSSQADVKLLYMKIRNAMATVDQMSIFTI
HGFCNFVLQQYFPGVQLRPQHPALTHTQVISRHIQDYLSQDLWKQVMSTEQFRLLTIRYN
VTSKHTISLIEKLLSSYGEESPSLLPSLQHVQETLNLWHRQLSSHLQNFPKENFYSQLLQ
CAKGFKKQPFSIDEDLSVFVDLLYSPLPSPKLFSFTKLAQTFQEKHRLMRYRPCAALDLL
QNASWQKHTEAFCNVDLIFNTLLYDIQNYLKRHYTPWISPDESIVVLEKLLSSPEAQRIV
SSLRERYQLVLIDEFQDTDKKQWNIFSLLFAHENFSGSLFLIGDPKQSIYEWRNADLPTY
LKAKSSFPKHSQLYLLNNYRSTPKLMHAINHLFQKISPFLEISGYPPIEYSPLIPKALHE
FSSSHAPIHFFPYEDRVSQALWISSEALHLQKHHQIPLGNMAILVSDSSQAFDFITHCSL
PVSFSKKKSVLHLTETYLLTLAMLEALLFPENYERISRVLLSSLFGLSASQISQEKERFT
TYFLSLRSHLFQHGLLATFYFLCSTQGETLLSTPQGDLIFQEMEKLCSYLDSLSSHPYQQ
LLHLQFFSETGRWEEELALSLHAQDPNTLKITTIHSSKGLEYDVVFCIGLDTHKKNKSPS
ESLREMYVACTRAKKQLYIPLSLQKQHSSALSHYLQAVGSYATLEELVTHLIQEQPELFS
YSSEAPSFSPLNFDFLPPETFSLSLPSPKKIYSFSSVKLLDSQDPPESLHSSITLSKTHL
PLGKKTGLLMHKILEEALLMPHSDLSRIRSIIYPLVQNTHLEGYEPMIEQLLTTVFSFPL
TFSSQTFTLEEISKNHMFKEVSFLFSQEEELWQGVIDLFFKHQDHYYIIDWKTSFLGENT
SDYTPERLRAYIQKEKLDLQGYIYIDAAQKFLRQFDIHHNVEMGFVFLRGLDTLGNGFFP
LEARFSTPTIIQKYPVYH
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggaagcttttaatatctttgatccgctcacctctatccaagggaagttttttttagaa
gcttctgcaggcacaggaaaaacatttactatagaacacatcatcctccgagcccttcta
gaggataccttatcccatcccgataaggttttagcagtaaccttcactaatgcagcaaca
aacgagttaaaacaacgcattcacgccaccctaagaagctgtctcgaaactctttcccat
tttgatatcacccataaagatctccccccctatctttcctcccaagcagatgtaaagctg
ctttacatgaaaattcgcaatgctatggcgacggtagatcagatgtcgatatttacgatt
catggcttttgtaatttcgtattacaacaatattttcctggagtccaattacgtcctcaa
caccccgcgcttacacatacgcaggtaatttctcgtcatatccaagattaccttagccaa
gacctttggaaacaggtgatgagtacagaacagttccgcttgcttaccatccgctataat
gtcacctctaaacacacaatttctctcatagaaaagctgctatctagttatggtgaggag
tccccctctctcctcccttcattacagcacgtacaagaaaccctaaatctttggcatcgt
cagctctcgtcgcaccttcaaaactttcccaaggaaaatttttactctcaacttttacag
tgtgctaaaggctttaaaaaacagcccttttccatagatgaagatctctctgtatttgta
gatttactctattctcctcttccctctccaaagcttttttcctttactaagcttgctcaa
accttccaagaaaaacaccgtttgatgcgctatcgtccttgtgcagctttagatctttta
caaaatgcttcttggcaaaagcatacagaagcattttgtaatgtggatcttatctttaat
accttactctatgacattcaaaactatttaaagcggcactataccccatggatttctcct
gatgagagcattgtggttttagaaaagctactttcctcccctgaagcccaaaggatcgtt
tcttctttaagggaacgctaccaactagtccttattgatgaattccaagatactgataaa
aaacaatggaatatcttctctttactctttgctcatgaaaatttctctggatccctattt
ctcattggggaccctaagcaatctatttatgaatggagaaacgctgatctccccacgtat
ttaaaagccaagtcttctttccctaaacattctcagctttacctcttaaataactaccgc
tccacccccaagcttatgcatgccatcaatcacctgttccaaaagatttctccgttttta
gaaatctctgggtatccccctatagaatactctcctctcatccctaaagcgctccatgaa
ttctcttcttcccatgcccctatacattttttcccttatgaagatcgcgtttcccaagcc
ttatggatctcttctgaagctctacacttacagaagcaccaccagatccctctagggaac
atggcaattttagtctcagactcttctcaagcttttgattttattacgcactgctctctt
cccgtatctttttctaagaaaaagtctgttcttcatcttactgaaacctacttgctaact
ctagcgatgctagaagctcttctttttcccgaaaactacgaacgaataagccgcgttttg
cttagcagcttatttggattgtcagcatctcaaatctctcaggaaaaagaacgtttcaca
acatatttcctttccttacgctctcatcttttccaacatggcttgttggctactttctat
tttctctgctcaactcaaggagaaaccctcctaagcaccccacaaggggatcttatcttt
caagaaatggaaaagctttgcagttatttagattctctttcttcccatccttaccagcaa
ctgctgcatctgcaattcttctcagaaacaggaaggtgggaagaagagcttgctttatct
ttgcatgctcaagatccgaacacattaaagatcaccacgatccactcatctaaagggctg
gaatatgacgttgttttttgtattggcctagatacccataaaaaaaacaagtctccttca
gagtctctaagagaaatgtacgttgcctgtacaagagcaaaaaaacagctttatattccc
ctctctttgcaaaagcagcactcctctgctctttctcactatcttcaggctgtaggctct
tatgctactcttgaagaacttgtaacccacctcatacaagagcaaccagaactgttttct
tattcctcagaagcaccatctttctctcctttaaattttgatttccttcctccggaaacg
ttctccttatccttgccctccccaaaaaaaatttattctttctcttcagtaaaactacta
gattctcaggatcctccagaatccttgcattcttctataactctctctaagacccatcta
cctctaggaaaaaaaaccggactcctgatgcataaaatcttggaagaggcgctcctaatg
ccacatagtgatctctcccgaatacgttctatcatctatcctctcgtacaaaatacccac
ctggaaggttatgaacccatgatagaacagctgctaactacagtattttcttttccttta
acgttttcatctcagacatttactttggaagagatctcaaaaaatcacatgtttaaggag
gtctcttttcttttctctcaagaagaagagctgtggcagggggttatcgatctctttttc
aaacatcaagatcattattacattatcgattggaaaacttcctttcttggagaaaatact
tctgactataccccagaacggctccgagcttatatccaaaaagaaaagttagatttgcaa
ggatacatttatatagatgctgctcaaaagttccttcgacaatttgatatccaccacaat
gtagaaatgggatttgtatttcttcgaggtctggacaccttaggaaacggattttttccc
ctagaagctaggttttctactcccacaataatccaaaaatatccggtctatcattag
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