Chlamydia pecorum P787: CPE3_0013
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Entry
CPE3_0013 CDS
T02853
Name
(GenBank) putative endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
cpec
Chlamydia pecorum P787
Pathway
cpec03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPE3_0013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpec03400
]
CPE3_0013
Enzymes [BR:
cpec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CPE3_0013
DNA repair and recombination proteins [BR:
cpec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CPE3_0013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AGW39371
LinkDB
All DBs
Position
complement(17359..18231)
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AA seq
290 aa
AA seq
DB search
MINILPPPQFPLLGAHTSISGGLQNALYEGREIGASTIQMFTANQRQWQRRPLSQEAIAS
FHHALEETELSYIMSHAGYLINPGAPDPIVLEKSRTCLYQEIRDCISLGISFVNFHPGAA
ISDSKESCMDRIISSFSLARPLFESSPPLVVLLETTAGQGSLVGSSFEELGYLIHGLKDK
IPIGVCLDTCHIFAAGYNISSSEGWEQVLKQFDQHIGLSYLRALHLNDSIFPLGKHKDRH
APIGEGYIGKECFKFLMTDPRLRNIPKYLETPGGPDLWVKEIQMLLSFSK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgataaatatcctccctcctccgcaatttcctttattaggagcgcacacctccatctct
ggaggtcttcaaaatgccctctatgaaggacgtgaaatcggagcttccactatccaaatg
tttactgcaaaccaaaggcaatggcagcgccgccctctttctcaggaagctattgcctct
tttcaccatgccctagaagaaaccgagctttcttacatcatgagccatgctggatacttg
attaatcctggagctcccgacccgattgttttagagaaaagccgtacttgcctataccaa
gaaattagagattgcatcagcttaggaatctcttttgtaaatttccatcctggagcagca
atttctgactccaaagaatcttgcatggatagaattatttcaagcttctctttagctcgt
cccctctttgaatcctcccctccccttgttgttctcctggaaaccacagcaggtcaaggc
tctttagtgggtagttctttcgaagaattaggatatcttattcacggtctcaaagacaaa
atccccataggggtatgcttagacacttgccatatctttgctgccggctacaacatttcc
tcctctgaaggatgggagcaggttcttaaacaatttgatcaacacatcggtttgtcctat
ttaagagctttgcacttaaatgactccatttttccccttgggaaacataaggaccgccac
gcccctataggagaaggctatatcggaaaagaatgctttaaatttttaatgacagatcct
agattgcgcaatattcctaaatacctagaaacccccggagggccagacttgtgggtcaag
gaaatccagatgttgcttagcttctcaaaataa
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