Chlamydia pecorum P787: CPE3_0117
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Entry
CPE3_0117 CDS
T02853
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cpec
Chlamydia pecorum P787
Pathway
cpec03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CPE3_0117 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpec03021
]
CPE3_0117 (rpoA)
03400 DNA repair and recombination proteins [BR:
cpec03400
]
CPE3_0117 (rpoA)
Enzymes [BR:
cpec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CPE3_0117 (rpoA)
Transcription machinery [BR:
cpec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CPE3_0117 (rpoA)
DNA repair and recombination proteins [BR:
cpec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CPE3_0117 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_A_bac
tRNA-synt_1c_C
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
AGW39469
LinkDB
All DBs
Position
115382..116506
Genome browser
AA seq
374 aa
AA seq
DB search
MSENLQNLLYDKFELPESVKMLSMEGFSTDTHARFVAEPLEKGMGHTLGNALRRALLIGL
EAPAIISFSMTGVLHEYMAIEGIIEDVTNIILNLKSALLKKHPMQGSEEGRSTQLLKSSI
SIDASDLAAVGGQKEVTLGDLLQEGGFEAVNPEQVIFTVTQPMQLDITLRVAFGRGYTTS
ERIVLEDKGVNEIVLDAAFSPVCLVNYYVEDTRVGQDTDFDRLILQVETDGRITPKEALA
FSTQILTKHFSIFEKMDEKRIVFEEAVSIEKENKDDILHKLILGINEIELSVRSTNCLSN
ANIETIGELVIMPEPRLLQFRNFGKKSLCEIKNKLKEMKLELGMDLSQFGIGLDNVKEKM
KWYAEKIRVKGTKG
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaatttgcaaaatttactttacgacaagtttgagttgccagaatcggttaaa
atgctttcgatggaaggattttctacggatacgcacgctcgctttgttgccgagccttta
gaaaaagggatgggtcatactcttggcaatgctttaagaagagctttattaatcggttta
gaagctccagcaattatttcattttctatgaccggagttttgcatgagtatatggccata
gaaggtattatagaggatgtaactaatattattttgaacctgaagagcgctttattgaaa
aagcatccaatgcaagggtctgaagaaggaaggtctacacaattgctgaaatccagtatt
tctattgacgcttcagatttagctgctgttggcgggcaaaaagaagttactcttggagat
ttattgcaagagggagggtttgaagctgtaaacccagagcaggtgatttttactgtaacc
cagccaatgcaattagacattactttgcgggttgcttttgggcgagggtatactacttct
gagcgtattgttttggaagataagggcgtgaatgagattgttttagacgcggctttttct
cctgtctgtttagtgaattactatgtagaagatacccgtgtaggtcaggacacggacttt
gatcggttgattttacaagtagaaacagatggcagaattactccaaaagaagctcttgca
ttttctacgcaaattttgacaaagcatttctctatttttgaaaagatggatgagaagcgt
atcgtctttgaagaagctgtttccatcgaaaaagaaaataaagatgacattcttcataag
ctgattttaggaattaacgagatagagctttctgtaaggtcgacaaactgtttatctaat
gcaaatattgagactattggagagcttgtcattatgcctgagcctcgtttgttgcaattt
agaaattttgggaaaaaatctctatgtgaaatcaagaataagcttaaagagatgaagctt
gagttaggcatggatctaagtcagtttggtattggtttagataatgtaaaagaaaagatg
aagtggtatgccgaaaaaattcgcgtaaagggtactaaggggtaa
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