Corynebacterium pelargi: CPELA_04520
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Entry
CPELA_04520 CDS
T05936
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cpeg
Corynebacterium pelargi
Brite
KEGG Orthology (KO) [BR:
cpeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpeg03016
]
CPELA_04520 (truB)
Enzymes [BR:
cpeg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CPELA_04520 (truB)
Transfer RNA biogenesis [BR:
cpeg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CPELA_04520 (truB)
Prokaryotic type
CPELA_04520 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
DUF2867
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QAU52183
UniProt:
A0A410W899
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All DBs
Position
complement(981250..982152)
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AA seq
300 aa
AA seq
DB search
MTDPLANSGLVVVDKPQGMSSHDVVARLRRIFGTRRVGHAGTLDPMATGVLVAGIERGTK
FLAHMVADTKAYEATVFLGASTSTDDAEGERGELADATAIQAITEAEIEAEIARLRGPIM
QRPAAVSAIKIDGKRAYQRVREGEAVEIPPRPVTIDRFDVVDLRKHPDHIALDVVVECSS
GTYIRSLARDLGEALGVGGHLTALRRTAVGAFGLEDARSLEELEAHPELSVSLDQALIRC
YPVLEVSQQEAADLAMGKWLAPRGLRGVHAAVAPDGRAVALVKEKGKRLATVFVARPSTL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccccttgctaactcaggccttgtggttgtagacaagccacaaggtatgtcc
tcccatgatgtggttgctaggcttcgtcgcatctttggcaccaggcgagtcggccacgcc
ggcaccctggatccgatggctaccggtgtgttggtggcagggatcgaacgaggcacgaag
ttcttagcccacatggtcgcagataccaaggcctatgaggccaccgtgtttttgggtgct
tcaacatcaaccgatgatgctgagggtgagcgtggggaacttgccgacgccaccgcgatc
caggccatcactgaagcagagatcgaagcggaaattgcccggctccgcggcccgattatg
cagcgtcctgctgccgtaagcgccatcaaaatcgacgggaagcgcgcatatcaacgagtg
cgcgaaggcgaagctgtagagattcccccacggccggtgaccattgatcgcttcgatgtt
gtcgatctgcgcaaacaccccgatcatattgcgcttgatgtggtggtggagtgttcttcg
ggcacctatattcgctctttggctcgcgacttgggcgaggctttaggggttggcggccac
ctgactgcccttcggcgcacggccgtcggcgccttcgggcttgaagatgcccgcagcctg
gaagagctcgaagcgcatcctgaactcagcgtttctttagaccaggccctgatccgctgc
tacccggtgcttgaagtctcacaacaagaggccgccgatcttgcgatgggcaaatggctg
gctccccgtggtcttcgcggggtgcacgccgccgtggctcccgatggtcgcgcggtggcg
cttgtgaaagaaaagggcaagcggctcgccactgtctttgttgcacgcccctcgacgctc
tag
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