Corynebacterium pelargi: CPELA_04715
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Entry
CPELA_04715 CDS
T05936
Symbol
hrpB2
Name
(GenBank) ATP-dependent RNA helicase HrpB
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
cpeg
Corynebacterium pelargi
Brite
KEGG Orthology (KO) [BR:
cpeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpeg03019
]
CPELA_04715 (hrpB2)
Enzymes [BR:
cpeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CPELA_04715 (hrpB2)
Messenger RNA biogenesis [BR:
cpeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CPELA_04715 (hrpB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
AAA_19
HA2_C
AAA_22
nSTAND3
NACHT
HA2_N
SLFN-g3_helicase
ResIII
AAA_16
AAA_23
AAA_25
SRP54
Motif
Other DBs
NCBI-ProteinID:
QAU52222
UniProt:
A0A410W8E7
LinkDB
All DBs
Position
complement(1023657..1027559)
Genome browser
AA seq
1300 aa
AA seq
DB search
MSSRHRHAIPQDVQELLAQAPYSAVPRFRARLKKARSEKAFAAITKDLRESVAVVDARQA
AIPSMTYPEALPVSAYREELLDVIVNNQVVIIAGETGSGKTTQIPKLCLELGRGRRGLIG
HTQPRRLAARTVAERIAEELGQDIGESVGYAIRFDDRVSASTSVKLMTDGILLAEMQRDR
LLRAYDTIIIDEAHERSLNIDFLLGYLKQLLPKRPELKVIITSATIDPERFAEHFCDAEG
TPAPIVEVSGRTYPVEILYRPLEQTKGEKTIDVDPLDGLIQACKELMSYGPGDILCFFAG
ESDIRDAMEMIEKQHWKGVEVTPLFGRLSNQEQHKVFRPHAGRRIVLATNIAETSLTVPG
IHYVVDTGFARISRYSTRTKVQRLPIEPISQASANQRSGRCGRVADGVAIRLYSEQDFQS
RPEFTDPEILRTNLAQVILQMASLKLGDIQEFPFIQAPDTKAIRDGLLLLHELDALEQRD
AADPVLTATGKQLARIPLDPRLARMLIEAQRLGVLFEAYVVVAALTIQDVRERPLEFQAQ
ADQKHARFSNKRSDFLSYINLWRYIRTQRDELSGNAFRKLMQQEFLHYMRIREWFDLVRQ
LRSIAEQLGWTDVKALPGNIDADALHRAVLSGLLSHIGVRDGESREYRGSRNTRFAIFPG
SSVSKAKPDMVMAAEMVETSRLWARDVAQIDPAWVEKLGANLLKHQYSEPFWSSKRAQPM
VHQRSTLYGVPVVEDRVIGYANVDQAAARDMFIREALIAGHWQTHHSFYHQNVKKLEAAG
DLEEKARRRDIVVDEETLYEFYDARLPARITSGRHFDHWWKKTKQQQPDLLDFDPEALVA
EHAAAVTEEAFPDIWRQGSLDYKLSYQFDPTAPRDGVTIEIPVPLLGGLSPEGFDWLVPG
LREELLTELIRSLPKASRRSVVPAPAFAEKAAELITAYQGTVTEQLAQALQRLGGSGIQA
SDFQVEKLPAHLRFSFAAVDKRGKIIDWDKDLARLQERQRQKIRSSVSKAARQSESKAYK
QWTKDTIGALEPEVHTSVEGQTVTAYPTLVRTEQGIARKVMPTKAQADAQLFSTTLTMLS
QDLPQQGAQMLKGLPLRQRVAVDKYPHGGAEGLLRDIRIAAIRDLMLEAGGPQRTPEGYQ
RLLEQIRPQLPSAVRQDTVALAPAIAAWLDAKQQLEGWEGPAIEDMQRQLQLMLPEHAVS
KLGAQRLKHIPRYAKAIALRLEDMELHPSRDAERQAVVNGLEVRLARAIQNRGKKPQIPA
QTLYSLQWQLQELRVSLFAQRLGTAQTVSERKIQKAIDAL
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcgccatcgccacgcaatcccccaagacgtccaggagcttttagcacaggct
ccctactccgcagtgccacggtttcgggcacgcttaaaaaaggcacgctccgaaaaagca
tttgcagcgatcaccaaagatctccgcgagtctgtggcagtagtcgatgcacgacaagcg
gctattccgtcgatgacgtatcccgaagcactgccggtgagcgcctaccgggaagaactg
ctggacgttatcgtcaataaccaggtcgtgatcattgcgggcgaaactggttcaggaaag
acaacgcagataccgaagctttgtttagaacttggccgaggaaggcgtggactcatcggc
cacacgcagcctcgtcgattggcggctcgcacggttgcagaacgcattgctgaagaatta
ggccaagatattggcgaatcggttggctatgccattcgctttgatgatcgggtctctgcg
tccacctcggtcaaactcatgacagacggtatcttgctcgccgagatgcagcgtgatcgg
ctgctcagagcctacgacaccatcattattgacgaggcccatgagcgcagcctcaatatt
gacttcctgcttggatacctcaagcaactgcttccaaagcgccccgaattaaaggtgatc
atcacctccgccacgattgaccccgaacgattcgccgagcatttctgcgatgcagaaggt
acaccggcgccgattgtggaagtctccgggcgcacctaccccgtggagattttgtatcgt
cccttggaacaaaccaagggagaaaagaccattgacgtagatccgctcgatggtcttatc
caggcgtgcaaagagctcatgagctatgggccaggcgatatcttgtgcttttttgctggc
gaatctgatattcgcgatgcgatggagatgattgaaaagcagcattggaaaggcgtggag
gtcactcccctctttggccggctttccaatcaggaacagcacaaggtgttccgaccccat
gcaggcaggcgcattgtattagccaccaatatcgctgaaacgtctctcacggtgcctggg
atccactacgtggttgataccggctttgcgcgtatttcgcgctattccaccaggaccaag
gtacaacgcctgccaatcgagccgatttcccaagcaagcgcgaatcagcgctccggtcga
tgtggccgcgtggccgatggcgttgccattcgcctgtattccgagcaggacttccagtcg
cgcccagaatttaccgatcctgaaattctgaggaccaatcttgcccaggtcatcttgcaa
atggcctccttaaaactcggcgatatccaggaattcccctttattcaggctcccgacacc
aaggcaattcgcgatggtctgttgctgctgcacgaattggatgccctggaacaacgcgat
gccgctgatccggtactgaccgcgactggcaaacagctagctcgcattccactggatccg
cgcttggcgcgcatgctcattgaggctcaacgcctcggggtgttgtttgaggcctatgtg
gtggtggcagccttgactatccaagacgtgcgcgagcgccctttggagtttcaggctcag
gcagaccaaaaacatgcgcgctttagtaacaaacgctccgatttcttgagctatatcaac
ttgtggcgctatatccgcacgcagcgcgatgagctcagcggcaacgcttttcgtaagctc
atgcagcaggagtttttgcactacatgcgcatccgggagtggttcgatctggtgcgccag
cttcgaagcatcgccgaacagttgggttggacggatgtgaaggcattgcccggcaatatt
gatgccgatgccctgcatagggctgtgctttccggcttactttcgcatattggtgttcgt
gatggtgaaagcagagagtatcgaggcagccggaatactcgttttgctatcttccctgga
tcttcggtgtcgaaggccaagcccgacatggtgatggctgccgagatggtcgaaacctcc
cggctttgggcacgagacgtcgctcaaatcgatccggcttgggtggaaaagctcggagct
aacttgctcaagcatcagtactctgagcccttttggtcgagcaaacgtgctcagccgatg
gtgcatcagcgctccaccttgtacggggtgccggtagtagaagatcgagttatcggctac
gccaacgtggatcaggcggctgcccgggacatgtttatccgcgaggcgcttattgcaggg
cattggcaaacccaccacagcttctatcaccagaacgtgaaaaagctcgaggccgcaggc
gatttagaagaaaaggctcgtcgtcgcgacatcgtggttgatgaagagacgctctatgag
ttttatgatgcaaggctgcctgctcgcatcacctccggccggcattttgatcactggtgg
aaaaagaccaagcaacagcagccggatttgctcgattttgaccctgaagccctggtggct
gagcatgcggcggctgtgaccgaggaggccttccctgatatctggcggcagggctctttg
gactataagttgagctatcagtttgacccgaccgcaccaagagacggtgtgaccatcgaa
attccggtgcccctacttggtggtttatcgcccgagggctttgattggttagttcctggc
ctgcgtgaggaactgctcaccgaattgattcgctctttgccaaaagcttctcgacgctct
gtggtgccagcaccagcgtttgcggaaaaagctgccgaactcatcactgcctaccaaggc
acggtgacagaacagctcgcccaagcgctgcagcgtttgggcggcagcgggatccaggcg
agcgattttcaggtagaaaaactgccagctcacctccggtttagctttgctgcggtggat
aagcgcgggaagatcatcgactgggataaagacttagctcggttgcaagaacgccagcgc
caaaagattcgttcttctgtatccaaggctgcccgccaatccgaatcaaaggcctataag
cagtggacgaaggacaccatcggtgcgcttgagcccgaggtgcatacatcggttgaaggc
cagacggtcaccgcgtatcccaccttggtgcgaaccgagcaaggcatcgcccgcaaagtc
atgccaacgaaggctcaggcggatgcgcagctttttagtacaacgttgacgatgttgtct
caagatttaccgcaacagggtgcacagatgcttaaagggcttccattgcgccagcgtgtt
gcggtggataaatatccccatggcggcgccgaggggttgttgcgtgatattcgcattgca
gctattcgggatttgatgctcgaagccggcggccctcagcgaactccggagggttatcag
cgtctactcgaacagattcgcccgcaacttccatcggcggtgcgccaagacaccgtcgca
ttggctcctgccattgcggcttggttggatgcgaaacagcaattagaaggttgggaaggc
ccggcaattgaggatatgcagcgacaattgcagctcatgcttcccgaacatgctgtaagc
aagcttggtgcccaaaggctgaagcatatccctcgctatgccaaagctattgcgttgcgc
ctggaggatatggagttgcatccctccagagacgccgagcgccaagcggtggtcaatggc
ttagaggtgcgtctggctcgcgccattcaaaaccggggcaagaaaccgcagattcccgca
cagaccttgtattccctgcagtggcagttgcaagagttgagggtgagcctatttgctcaa
cgcctcggcacggcccagaccgtgtcggaacgcaaaatccaaaaggcgattgatgcgctc
tag
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