Corynebacterium pelargi: CPELA_08240
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Entry
CPELA_08240 CDS
T05936
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpeg
Corynebacterium pelargi
Pathway
cpeg03420
Nucleotide excision repair
cpeg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPELA_08240 (pcrA)
03430 Mismatch repair
CPELA_08240 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpeg03400
]
CPELA_08240 (pcrA)
Enzymes [BR:
cpeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPELA_08240 (pcrA)
DNA repair and recombination proteins [BR:
cpeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPELA_08240 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CPELA_08240 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
DUF2800
Motif
Other DBs
NCBI-ProteinID:
QAU52903
UniProt:
A0A410WAA2
LinkDB
All DBs
Position
complement(1785069..1788272)
Genome browser
AA seq
1067 aa
AA seq
DB search
MINPVQLSQYLGQPYPPTKQQAAVIGAPLASSLVVAGAGAGKTETMAARVVWLVANGLVA
PEQVLGLTFTNKAAQQLAQRISGRLTTLRHSAYFDELDALLGDEQSLRAALEVIAPTVAT
YDSFAGRLVREFGLLLPVEPSARIISRTELMLIAQRVLKEYRGPINSNLTFNILVSRLVD
LNAEMEANLVEPQAIREETHALFAEADAVPTGRESINKTATGYLQKQEVRLQLLPVVEQF
RSYLREEKLMTFNQQMALAARLASEHPEVGAAMRERFSVVLLDEYQDTSYAQRVLLSALF
AESNVTAVGDPMQSIYGWRGGSASNLERFPEDFPHEGKPAKKYELTTSFRNPSSVLTLAN
QVAASILGSAHNPKRLVQPLEPLPNQGPGSVALGAFPTREEEITVVADALAQRYYQRESD
EPFTAAVLMRKQRDFGPMEQALRERGVPVEVVGLSGLLTIPEVADMLAIATMLVDPADDR
ASIHVLGSAAVGLDAADIKALQRRAAELGGSKEISSEGIADPLEKLKAQVQQVLQSDQDN
LAGLADAVADIGSAERIGLSPEGELRVRDLAAKLRFLRTTATNVALPDVFANIERVFNIR
TEVLQRPEEAGRVVGTTHLDRFAEVVEEYSRLKGATLPQFLQYVRMAIEHDKGLEPGEVE
VHADRVQILTVHKSKGLEWQHVAVMHCDHKTYESRTETWLKQEHRIPSALLGDADEDDES
MFGSPVLSEVDTETKAAFARSLERHREAFKQKNAAEAIRLFYVAMTRAETSLLLTCSEKP
PFEAFEQLHDVVEPDAILRWEWTAEDAKEQEDPPSAVFPQHREPKGADEVMAALEALPEL
IEDGDLFQTWEQDVSAIIQEHEALDAPSVEVALPRELTATDLVSLRDNPERFARRKRRPV
PFKPNEYAKRGTAFHEWIERQFGQAALLDEQELALGQEFAEENLDQLKEHFLASEWLNRT
PVAVEQPFEVAIGRHVLRGRMDAVFAQDDGYLVVDWKTGQLPTAQERKAVEMQLAVYRLA
WAKLQGIDPEAVQAAFYYVTKHELLAPQDLPGAHELEQLLEAQNPKR
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacccagtgcaactttcccaatacctcggccaaccatacccacccaccaagcag
caggccgccgtgatcggtgcgcctttggcatcatcactggtggttgctggagcaggtgcg
ggcaaaaccgaaactatggcggcacgagtggtgtggctggtggccaatgggcttgtggca
cccgagcaggtattagggctgacctttaccaataaagccgcgcagcaactcgcacaacgc
atcagtggtcgattgaccacccttcggcattcggcgtactttgatgagctcgacgcactc
ctaggggatgaacaatccttaagagcagcgctcgaggtgatcgcgccgacggtagcaacc
tatgactcctttgccgggcgcttggtgcgggaatttggtttgctcctgcccgttgaacct
tcggcacgcataatcagccgcaccgagttaatgctgatcgcccaacgcgtgctcaaagag
tatcgcggtccgatcaatagcaacctgacctttaatatcttggtatcgcgtctggttgat
ctcaacgccgaaatggaagccaacctcgttgagccgcaggcgattcgggaagaaacacac
gccttgtttgccgaagccgatgctgttcccaccggccgggaatctatcaacaaaacagcc
acggggtatctgcaaaagcaggaagtccggctccagctcctaccggtagtggagcaattc
cgcagctatctgcgcgaagaaaagctcatgaccttcaaccaacaaatggcgctggctgcc
cgcctagcctccgaacaccccgaggtgggtgctgcgatgcgggagcgcttctcggtggtg
ctgcttgatgaataccaagacaccagctacgcccaaagggtgctgttatctgcccttttt
gcagagagcaacgtcactgccgtgggtgatcccatgcagtcgatctatggctggcgaggt
ggatctgcatcgaacctcgaacgcttcccagaggactttccgcacgaggggaaacctgca
aagaaatacgagctcaccaccagttttagaaaccctagcagtgtgctcaccttggcaaac
caggtagcggccagcatcttgggctctgcccacaaccccaagcgcttggtgcagccgctc
gaaccactgcccaaccaaggtccaggctcagtggcgctcggggcgtttcctaccagggaa
gaagaaatcactgtcgtggccgatgcgctggcgcaacgctattaccagcgcgaaagcgac
gagccttttactgctgcggtgctcatgcgcaagcagcgagacttcgggcctatggaacaa
gcactgcgtgaacgtggcgttcctgtagaagtggtcgggctttccggcttactcaccatc
ccagaggtggccgatatgctcgccatcgccaccatgctggtggatcccgcagatgatcgc
gccagcatccatgtgcttggttcagcggccgtcggccttgatgccgccgatatcaaagca
ctacaacgccgagccgctgagcttggtggcagcaaagaaatcagtagcgaaggcattgca
gatcccctagaaaaactcaaagcccaagtccagcaggtgctgcaatccgatcaggacaac
ctggcaggtcttgccgatgccgttgccgatatcggtagcgccgaacgcatcggtttaagc
cccgaaggcgaactaagggtgcgtgatcttgccgcgaaattgcgattcttgcgcacaact
gccaccaatgtggcgctgcctgatgtctttgccaatatcgagcgagtattcaatatccgc
accgaggtgctccaacgccccgaagaagccggccgcgttgtaggaaccacccaccttgac
cgctttgccgaagtagtagaggaatactccaggctcaaaggggctacgctgccacaattt
ctgcagtacgtgcgcatggccatcgagcacgataaaggccttgagcccggagaagtggaa
gtgcatgccgatcgtgtgcagattcttaccgtccataagtccaagggtttggagtggcaa
cacgttgcggtgatgcactgcgatcacaaaacctatgaatctcgcaccgaaacgtggttg
aagcaggaacaccggattccttcggcattgcttggtgatgctgatgaagacgacgagagc
atgttcggctctccggtgctcagcgaggtcgataccgaaaccaaagcggcgtttgcccga
agcctcgaaaggcatcgtgaggcgtttaaacagaaaaacgctgccgaggcgattcgcctc
ttttatgtagcgatgactcgcgcagaaacctcgctgctgctgacctgctcagaaaagcca
cccttcgaagccttcgaacagctccacgatgtggtggaaccagacgctatcctgcgttgg
gagtggaccgccgaagacgccaaggagcaagaggatcccccaagcgctgtgtttcctcaa
caccgggagcccaagggcgctgatgaagtaatggctgctttggaggcattgcctgagctc
attgaagacggcgacttattccagacctgggaacaagacgtcagcgccatcatccaagaa
cacgaggcgctcgatgcccccagcgtggaggtggcattgccgcgcgaactgaccgccacc
gatctggtgagcctgcgggataatcccgaacgatttgccaggcgaaagcgcaggccagtg
ccttttaagcccaatgagtacgccaagcgtggcaccgcattccacgagtggatcgaacgt
caatttggccaggctgcactgcttgacgagcaggaactggccctcggccaggaatttgcc
gaggaaaacctcgaccagctcaaagaacacttcttagcctccgagtggctcaaccgcacc
ccggtggcggtggagcaaccctttgaagtggccatcggccgccatgtgctgcgaggacgc
atggatgcggtttttgcccaagacgacggctacctggtcgtggactggaaaaccgggcag
cttcccaccgcccaggagcgaaaagccgtggaaatgcagttggccgtctaccggcttgcc
tgggctaagctgcagggtattgatccagaagcagtgcaagcggctttctattatgtgacc
aaacatgagcttcttgctccccaagatctacccggtgcccatgagcttgagcagctcttg
gaagcacagaatccaaaacggtag
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