Corynebacterium pelargi: CPELA_09655
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Entry
CPELA_09655 CDS
T05936
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cpeg
Corynebacterium pelargi
Pathway
cpeg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpeg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CPELA_09655 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpeg03021
]
CPELA_09655 (rpoC)
03400 DNA repair and recombination proteins [BR:
cpeg03400
]
CPELA_09655 (rpoC)
Enzymes [BR:
cpeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CPELA_09655 (rpoC)
Transcription machinery [BR:
cpeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CPELA_09655 (rpoC)
DNA repair and recombination proteins [BR:
cpeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CPELA_09655 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QAU53186
UniProt:
A0A410WB74
LinkDB
All DBs
Position
complement(2078605..2082615)
Genome browser
AA seq
1336 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDLSTLEAEMLLEKKDVEADAESDIAERAQKLEED
LAELEAAGAKADARRKVQNAADKEMQHIRERAEREIDRLEEIWQTFVKLAPKQMIIDESI
YEELIDRYEDYFTGGMGAEAIQTLIRNFDLDAEAEELREIINNGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVSGPGNRPLKSLSDLLKGKAGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDFAQNIRSAKRMVERQR
PEVWDVLEEAIAEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYFLTMDKAEGELGGE
GAYKPASDDQPAQGVYSSYAEAIMARDRGVLGLQAKIKVRISHLRPPADIEAEQFPDGWQ
QGQTWLADTTLGRVMFNELLPWNYPYLEGVMVRKGGGSDKIMLGDVINDLAAKYPMITVA
QTMDKMKDAGFYWATRSGVTIAMSDVLVLPNKDEMLENYEAEARKIERKYWEQGALTERE
RYDRLVELWKDATDEVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTRLGIRVPVAEAVKNAEGKVTSYTGNALIETSVAGRVAATDIKDSEGEVLVAAGENL
TEAAIEKIIAAGVEQIKVRSVLTCQTATGVCAKCYGKSMATGQLVDIGEAVGIVAAQSIG
EPGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGTVHLEDEGNFYTL
TITPDDGSDNVVYEKLSKRQGLATVRVPMESNPGAMIERTLAEGDHVEVGDRLLRGPADP
HDVLEVLGRRGVEQHLVDEVQDVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPG
TLVDLSEAKAANAEALASGGQPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAI
NKRSDKLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGESVYGDETF
GEFVGKSVPLDEAYDL
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgaactccgcatcggcctggccaccgccgacgacatc
cgccgttggtccaaaggtgaggttaagaagccggagaccattaactaccgcacgctcaag
cctgagaaggacggcttgttctgtgagcgtattttcggccccacccgcgactgggagtgt
gcctgcggtaagtacaagcgcgtgcgctacaagggcatcatctgtgaacgctgtggcgtt
gaggtgaccaagtccaaggtgcgtcgtgagcgcatgggccacattgagttggccgcgccc
gtgacccacatctggtacttcaagggcgtgccttcacgcctgggctacctgcttgacctt
gctcctaaggatcttgagcgcatcatctacttcgctgcgaacatcatcaccagcgttgat
gaggaagctcgccacaacgacctgtccaccctggaagccgagatgcttctagaaaagaag
gacgttgaggccgatgcagaatccgatattgcagagcgtgcccaaaagcttgaggaagac
ctcgcagagcttgaagccgcaggtgcaaaggctgatgcgcgccgcaaggtgcaaaatgca
gccgataaggaaatgcagcacatccgcgagcgtgccgagcgtgagatcgaccgcctcgag
gaaatctggcagacctttgtcaagcttgccccgaagcagatgatcatcgatgagtccatc
tacgaagagctcatcgaccgctacgaggattacttcaccggcggcatgggtgctgaggcc
attcagaccctgattcgcaacttcgacctcgacgccgaggccgaggagctgcgcgagatc
atcaacaatggcaagggccagaagaagatgcgcgcgctcaagcgcctgaaggttgtggct
gcattccagcgttcgggtaacgacccggctggcatggtgctcgactgcatcccggtgatc
ccgccggagcttcgccccatggtgcagctcgacggtggccgtttcgccacctcggacctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgcctcaagcgcatgatcgatctc
ggtgctcctgagatcatcgtgaacaacgaaaagcgcatgctgcaggaatctgtggacgcg
ctcttcgacaacggccgtcgtggccgtccggtgtctggtccgggcaaccgcccgctgaag
tccctgagcgacctgctcaagggtaaggctggccgtttccgtcagaacctgctgggtaag
cgtgttgactactccggccgttcggtgattatcgtcggcccgcagctcaagctgcatgag
tgtggtctgcccaagctcatggcgttggagctgttcaagcccttcgtgatgaagcgtctg
gtggaaaatgacttcgcccagaacatccgctccgcaaagcgcatggtggaacgccagcgc
cccgaggtgtgggacgtgctggaagaggccattgctgagcacccagtgatgctcaaccgt
gcgcctaccctgcaccgcctgggtattcaggccttcgagccgaagctggtggaaggtaaa
gccatccagctacacccgctggcctgtgaagccttcaacgccgacttcgacggcgaccag
atggctgtgcacctgccgctttccgcagaagcacaggcagaggcccgcatcctcatgctc
gcctccaacaacatcctttcgcctgcctcgggtaagcccctggctatgccgcgtctggat
atggttaccggcctgtacttcctcaccatggacaaggccgaaggcgagctcggtggcgag
ggtgcctacaagcctgctagcgatgatcagcctgcacagggcgtgtactcctcctacgcc
gaggcaatcatggcgcgcgaccgtggcgtgcttggcctacaggccaagatcaaggtgcgt
atttctcacctgcgcccgccggcagacatcgaggcagagcagttccccgatggctggcaa
cagggtcagacctggttggcagacaccaccttgggtcgtgtcatgttcaacgagttgctg
ccgtggaactacccctaccttgaaggcgtcatggtgcgtaagggtggcggttccgacaag
atcatgcttggcgatgtgattaatgatctcgccgccaagtaccccatgatcaccgtggct
caaaccatggacaagatgaaggatgccggcttctactgggcaacccgttccggtgtcacc
atcgccatgtccgacgtgctcgtgcttcccaacaaggacgagatgctcgaaaactacgag
gccgaggcccgcaagatcgagcgcaagtactgggagcagggtgcgctgaccgagcgcgag
cgttacgaccgcctggtggaactgtggaaggatgccaccgacgaagttggtcaggccgtc
gaggatctgtaccccgacgacaacccgatcccgatgatcgtgaagtccggtgctgccggt
aacatgcgtcagatctggaccctggccggcatgaagggcatggttgtgaactccaagggt
gactacatcacccgcccgatcaagacctccttccgtgaaggtctgtcggtgctggagtac
ttcaacaactcccacggttcgcgtaagggcctggccgatactgcgcttcgtaccgccgac
tccggctacctcacccgtaggcttgtcgacgtcgcacaggacgtcatcgtgcgcgaggaa
gactgcggtacccgccttggtatccgagtgcccgtagccgaggccgtgaagaatgccgaa
ggcaaggtcacttcctacaccggtaacgccttgattgaaacctctgtggccggccgtgtg
gctgccaccgatatcaaggactccgagggcgaagtgctcgttgctgctggtgagaacctc
accgaggctgccatcgagaagatcatcgccgctggtgttgagcagatcaaggtgcgttcg
gtactgacctgccagaccgccaccggcgtgtgcgccaagtgctacggcaagtccatggct
accggccagctcgtcgatatcggcgaggccgtcggcatcgtggctgcacagtccattggt
gagcccggtactcagctcaccatgcgtaccttccaccaaggtggtgtgggtggcgacatt
accggtggtctgccgcgtgtgcaggagctcttcgaggctcgtgtaccaaagaaccgcgcg
ccgatcgcttcggttgccggcaccgtgcacctggaagacgagggcaacttctacaccttg
accattaccccggacgatggatccgacaatgtggtctacgagaagctctccaagcgccag
ggtcttgccactgtgcgcgtgcccatggaatccaacccgggtgccatgatcgaacgcacg
ctggctgaaggcgatcacgttgaggttggcgaccgcctcctgcgcggccctgccgatcct
cacgacgtgcttgaggtacttggtcgccgcggtgtggaacagcacctggtagacgaagtg
caggatgtgtaccgcgcccagggtgtggccatccacgacaagcacatcgagatcatcatc
cgccagatgctgcgtcgcggcaccgtgatcgagtcgggctccaccgagttcctgcccggt
accctggtagatctctccgaagccaaggcagccaatgccgaggcactggcctccggtgga
cagcccgccgagctgcgtagcgagatcatgggtattaccaaggcctcgctggcaaccgaa
tcctggctctccgcggcctccttccaggagaccacccgtgtgcttaccgatgccgctatt
aacaagcgctccgataagctcatcggcctcaaggagaacgtgatcatcggtaagctgatc
ccggccggtaccggcatctcgcgttaccgcaacatctcggtcaagcccaccgaggctgcg
cgcaacgccgcctactccatccccacctatggtgaatccgtctacggcgatgaaaccttc
ggtgagttcgtgggcaagtctgtgccgctcgatgaggcatacgacctctaa
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