Campylobacter peloridis: CPEL_0012
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Entry
CPEL_0012 CDS
T03559
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cpel
Campylobacter peloridis
Pathway
cpel03410
Base excision repair
cpel03430
Mismatch repair
cpel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPEL_0012 (recJ)
03430 Mismatch repair
CPEL_0012 (recJ)
03440 Homologous recombination
CPEL_0012 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpel03400
]
CPEL_0012 (recJ)
DNA repair and recombination proteins [BR:
cpel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CPEL_0012 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CPEL_0012 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CPEL_0012 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
LANC_like
Motif
Other DBs
NCBI-ProteinID:
AJC83887
LinkDB
All DBs
Position
10857..12428
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AA seq
523 aa
AA seq
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MLTKAKIKEILHQRFVNDTHVKLCDLPMPSCLKDVYKGALRIKEAIEKNQKVAIVGDYDV
DGVISCVILSEFFDDIGFDYVVKIPNRFKDGYGLNEEIINELDKVDLIITVDNGIAAFEA
AELCLQKGIDLIITDHHMPPENLPKAYAIINPKQKDCEFPDIEICGAQVAWYLVAALKEV
CKINYNMCKFIELLAIAIIADMMELRDLNRALVRKGIECINDSKRAAFKAIKQCFGKDKF
ELENIGFLIAPLINSAGRMDDAIISYKFLHSKNINEVMKYLEQIIAYNNNRKDEERELFK
QCLEQVNENHPVIIVNGQNWHEGVLGIVASRLAKHFNKPAFVFSECEQKAKASVRSVGKI
DILNVIEQAKEFVLSYGGHKGAAGVMVELENLESFKNKLNDICQSIPKEDFYNTEEVLGS
IDPNEVDFELLELLESFEPYGHKNPKPHFKFSQLLVKNKKKIGKDESHMKLILTQGNKTL
EALFFNFDHEPKLGENIDFIASISKNNFKGLITPQLTIKEIIK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgctaactaaagctaagataaaagaaattttacatcagcgttttgtaaatgatactcat
gtaaaactttgtgatttacctatgccatcttgcttgaaagatgtttataaaggtgcttta
cgcattaaagaagctattgaaaaaaatcaaaaagtagctatagtgggtgattatgatgtt
gatggggtgatatcatgtgtgattttatctgaattttttgatgatattggttttgattat
gtggtaaaaattccaaatcgttttaaagatggttatggcttaaatgaagaaattatcaat
gaacttgataaggtagatttaatcatcacggtggataatggcatagcagcatttgaggct
gcagaactttgcttacaaaaaggaattgatttaatcattactgatcatcacatgccacca
gaaaatttaccaaaagcgtatgctattatcaatccaaagcaaaaagattgcgaatttcca
gatattgaaatttgtggggctcaagtagcatggtatttagttgctgctttaaaagaagtt
tgtaagattaattataatatgtgtaaatttatagaacttttagctatagctataatcgca
gatatgatggagcttagagacttaaatagagcattagttagaaaaggtatagaatgtatt
aatgactcaaaacgagcagcatttaaagctattaagcagtgttttggaaaagataaattt
gaacttgaaaatattggttttttgattgcacctttgataaatagtgcaggaagaatggat
gatgcgattatttcttataaatttttgcattctaaaaatataaatgaagtgatgaagtat
ttagagcaaattatcgcttacaataataatcgcaaagatgaagaacgagagctttttaag
caatgcttagagcaagttaatgaaaatcatcctgtgattatagtcaatgggcaaaattgg
catgaaggagttttaggtatagttgcatcgcgtttagcaaaacattttaacaaacctgct
tttgttttttcagaatgtgagcaaaaggctaaagctagtgttagaagtgtaggtaaaata
gatattttaaatgttatagaacaagccaaagaatttgttttaagctatggtggacacaaa
ggtgctgcaggggttatggtagagcttgaaaatttagaatctttcaaaaacaaacttaat
gatatttgtcaaagtattccaaaagaagatttttacaatacagaggaagttttaggtagt
attgatccaaatgaagtagattttgaattactagaacttttagagtcttttgaaccttat
ggccataaaaatcctaagccacattttaaatttagccaacttcttgtaaaaaataagaaa
aaaataggcaaagatgaaagtcatatgaaattgattttaacccaagggaataaaacttta
gaagctttattttttaattttgatcatgaaccaaaacttggtgaaaatatagattttatc
gctagtatttctaaaaataacttcaaaggtttaataactcctcaactaaccataaaagag
attataaaataa
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