KEGG   Campylobacter peloridis: CPEL_1125
Entry
CPEL_1125         CDS       T03559                                 
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma70 factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
cpel  Campylobacter peloridis
Pathway
cpel02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cpel00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CPEL_1125 (rpoD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpel03021]
    CPEL_1125 (rpoD)
Transcription machinery [BR:cpel03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CPEL_1125 (rpoD)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2 Sigma70_r4_2
Other DBs
NCBI-ProteinID: AJC84941
LinkDB
Position
1150904..1152781
AA seq 625 aa
MANETNALETLFKENSKDYITYEKLVKHFQKLPNASSAKKIRDLMNKYKVELISSAEIAK
KRNIEEAKKLQEEKQKLQDTSLENEFDLANENDLLEWSRSDSPVRMYLREMGQIALLNKD
EEIEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLINRERRVKELFKSFEEDDKNEED
KNEEELDSEEENENEENENSNDKKPKKTNKKEDERTLKVIESFKALEKAKKEWLKTISTI
SAEKNEDELLDKLIIAFKKNILKEKLMDLGPTSKLISEIVKSMETALKSDEEFDKELKRL
EYRLPMFSDELKQRHADILKDITKLSKEEITERALETTMVSTYMEIKKLIQTKEASQNSF
DLEKDQLKEILEQIKRGKKISDEAKTRMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIG
LMKAVDKFEYKRGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINQINKIIREYL
QKEGKEPDVSIIAKEVNLSIDKVKQVIKITKEPISLEAPISNEDDGKFGDFVEDRTSLSP
MDHILKDDLKEQIDEVLDQLNDREKAVIRMRFGLMDDESDRTLEEIGKELNVTRERVRQI
ESSAIKKLKHPKVGRKLKNYIEGWK
NT seq 1878 nt   +upstreamnt  +downstreamnt
atggctaatgaaacgaatgctttagaaacattatttaaggaaaattctaaagattatatc
acatatgaaaaacttgtcaagcattttcaaaaacttccaaatgcaagcagtgctaaaaaa
attcgtgatttaatgaataaatataaagtagaattaatttcttctgctgaaattgcaaaa
aaaagaaatatagaagaagctaaaaaattacaagaagaaaaacaaaaattacaagatacg
agtttagaaaatgaatttgatttagccaatgaaaatgatttactagaatggagtagatct
gattctccagtaagaatgtatttaagagaaatggggcaaattgctcttttgaacaaagac
gaagaaatagaaatttctaagaaaatagaattaggtgaagatataataatcgatgcattt
tgctcggtgccttatttgattgattttatattagattataaagaacctttaattaataga
gaaagaagagtaaaagaactttttaaaagttttgaagaagatgataaaaatgaggaagat
aaaaatgaggaagaattagattctgaagaagaaaatgaaaatgaagaaaacgaaaattct
aatgataaaaaacctaaaaaaacaaataaaaaagaagatgaaagaacattaaaagtcata
gaaagttttaaagctttagaaaaagcaaaaaaagaatggttaaaaacaatttctactatt
agtgcagaaaagaatgaagatgaacttttagataaactaataatagcatttaaaaaaaat
atcttaaaagaaaaattaatggatctaggccctacttcaaagctaatatcagaaatagta
aaatccatggaaacagcgttaaaaagcgatgaggaatttgataaagaattaaaacgatta
gaatatcgcttaccaatgttttcagatgaactaaaacaaagacatgcagatatattaaaa
gatattaccaaacttagcaaagaagaaattactgagcgtgcgttagaaacaacaatggtt
agtacttatatggagattaaaaaactaatccaaacaaaagaagctagtcaaaattcattc
gacttagaaaaagatcaacttaaagaaattttagaacaaataaaacgcggtaaaaaaata
tctgatgaagcaaaaactagaatggcaaaatcaaatttacgcttagttgtaagtatagct
aaaagatatacaaatagaggcttgccatttttagatctcatacaagagggtaatataggg
cttatgaaggcggttgataaatttgaatataaacgaggttataaattttcaacttatgct
acttggtggataagacaagctatatcaagagcaatagctgatcaagcaagaacaattaga
attcctatacatatgatagaaacaattaatcaaattaataaaattatccgtgaataccta
caaaaagaaggtaaagaacctgatgtaagtattattgcaaaagaggtaaatttaagcatt
gacaaagtaaaacaagttataaaaatcaccaaagaaccaatttctttagaagctccaatt
agcaatgaagatgatggtaaatttggagattttgttgaagatagaacatcgctttcacct
atggatcatattttaaaagatgatttaaaagaacaaatcgatgaagttttagatcaatta
aacgacagagaaaaagctgttattagaatgagatttggtttgatggatgatgagagtgat
agaactttagaagaaataggcaaagaattaaatgttacaagagaaagagtacgtcaaata
gaaagctcagcgattaaaaaattaaaacatccaaaagttggtagaaaacttaaaaactac
atagaaggatggaaataa

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