Campylobacter peloridis: CPEL_1125
Help
Entry
CPEL_1125 CDS
T03559
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
cpel
Campylobacter peloridis
Pathway
cpel02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cpel00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CPEL_1125 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpel03021
]
CPEL_1125 (rpoD)
Transcription machinery [BR:
cpel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CPEL_1125 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AJC84941
LinkDB
All DBs
Position
1150904..1152781
Genome browser
AA seq
625 aa
AA seq
DB search
MANETNALETLFKENSKDYITYEKLVKHFQKLPNASSAKKIRDLMNKYKVELISSAEIAK
KRNIEEAKKLQEEKQKLQDTSLENEFDLANENDLLEWSRSDSPVRMYLREMGQIALLNKD
EEIEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLINRERRVKELFKSFEEDDKNEED
KNEEELDSEEENENEENENSNDKKPKKTNKKEDERTLKVIESFKALEKAKKEWLKTISTI
SAEKNEDELLDKLIIAFKKNILKEKLMDLGPTSKLISEIVKSMETALKSDEEFDKELKRL
EYRLPMFSDELKQRHADILKDITKLSKEEITERALETTMVSTYMEIKKLIQTKEASQNSF
DLEKDQLKEILEQIKRGKKISDEAKTRMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIG
LMKAVDKFEYKRGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINQINKIIREYL
QKEGKEPDVSIIAKEVNLSIDKVKQVIKITKEPISLEAPISNEDDGKFGDFVEDRTSLSP
MDHILKDDLKEQIDEVLDQLNDREKAVIRMRFGLMDDESDRTLEEIGKELNVTRERVRQI
ESSAIKKLKHPKVGRKLKNYIEGWK
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgaaacgaatgctttagaaacattatttaaggaaaattctaaagattatatc
acatatgaaaaacttgtcaagcattttcaaaaacttccaaatgcaagcagtgctaaaaaa
attcgtgatttaatgaataaatataaagtagaattaatttcttctgctgaaattgcaaaa
aaaagaaatatagaagaagctaaaaaattacaagaagaaaaacaaaaattacaagatacg
agtttagaaaatgaatttgatttagccaatgaaaatgatttactagaatggagtagatct
gattctccagtaagaatgtatttaagagaaatggggcaaattgctcttttgaacaaagac
gaagaaatagaaatttctaagaaaatagaattaggtgaagatataataatcgatgcattt
tgctcggtgccttatttgattgattttatattagattataaagaacctttaattaataga
gaaagaagagtaaaagaactttttaaaagttttgaagaagatgataaaaatgaggaagat
aaaaatgaggaagaattagattctgaagaagaaaatgaaaatgaagaaaacgaaaattct
aatgataaaaaacctaaaaaaacaaataaaaaagaagatgaaagaacattaaaagtcata
gaaagttttaaagctttagaaaaagcaaaaaaagaatggttaaaaacaatttctactatt
agtgcagaaaagaatgaagatgaacttttagataaactaataatagcatttaaaaaaaat
atcttaaaagaaaaattaatggatctaggccctacttcaaagctaatatcagaaatagta
aaatccatggaaacagcgttaaaaagcgatgaggaatttgataaagaattaaaacgatta
gaatatcgcttaccaatgttttcagatgaactaaaacaaagacatgcagatatattaaaa
gatattaccaaacttagcaaagaagaaattactgagcgtgcgttagaaacaacaatggtt
agtacttatatggagattaaaaaactaatccaaacaaaagaagctagtcaaaattcattc
gacttagaaaaagatcaacttaaagaaattttagaacaaataaaacgcggtaaaaaaata
tctgatgaagcaaaaactagaatggcaaaatcaaatttacgcttagttgtaagtatagct
aaaagatatacaaatagaggcttgccatttttagatctcatacaagagggtaatataggg
cttatgaaggcggttgataaatttgaatataaacgaggttataaattttcaacttatgct
acttggtggataagacaagctatatcaagagcaatagctgatcaagcaagaacaattaga
attcctatacatatgatagaaacaattaatcaaattaataaaattatccgtgaataccta
caaaaagaaggtaaagaacctgatgtaagtattattgcaaaagaggtaaatttaagcatt
gacaaagtaaaacaagttataaaaatcaccaaagaaccaatttctttagaagctccaatt
agcaatgaagatgatggtaaatttggagattttgttgaagatagaacatcgctttcacct
atggatcatattttaaaagatgatttaaaagaacaaatcgatgaagttttagatcaatta
aacgacagagaaaaagctgttattagaatgagatttggtttgatggatgatgagagtgat
agaactttagaagaaataggcaaagaattaaatgttacaagagaaagagtacgtcaaata
gaaagctcagcgattaaaaaattaaaacatccaaaagttggtagaaaacttaaaaactac
atagaaggatggaaataa
DBGET
integrated database retrieval system