Campylobacter peloridis: CPEL_1160
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Entry
CPEL_1160 CDS
T03559
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpel
Campylobacter peloridis
Pathway
cpel03420
Nucleotide excision repair
cpel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPEL_1160
03430 Mismatch repair
CPEL_1160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpel03400
]
CPEL_1160
Enzymes [BR:
cpel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPEL_1160
DNA repair and recombination proteins [BR:
cpel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPEL_1160
MMR (mismatch excision repair)
Other MMR factors
CPEL_1160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
PcrA_UvrD_tudor
AAA_12
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AJC84975
LinkDB
All DBs
Position
1189589..1191652
Genome browser
AA seq
687 aa
AA seq
DB search
MNLLQGLNDSQKEAIMHIDGAMLILAGAGSGKTKTITTRLAYLIDHVGIPAQNTLTLTFT
NKAASVMKTRALALLKDQNLHNPLLCTFHKFGLLFLRLYSERIKRANNFVIIDTDDKKKI
LKDLAGENIKNSLASIGAYISNFKNQSKNAEEIRKELEFLKDEKSKNYEEIIHLYEQYEN
FLIQNNFMDFDDLLMLTNKILEDENFAKEQSKIYQYITVDEYQDTNALQYQILKKLCASH
ENICVVGDDDQSIYGWRGAKIENILNFKEQFNNVKLVKLEQNYRSTNAILQAANELIEHN
RKRLGKTLICTKDKGEEIEILQNDDEKIESFKVAKEISKLLNSKVNPSEIAILYRVNALS
RALEEAFSKEKIPFKLLSGIRFYERAEIKDIISYLRLLSNLNDDYSFKRIINRPKRNFGN
ASLEKLENYAKENHLSLFESLCILQGSGFFSKKTDKEIEKFILSIHKIKEKEDLLGIILS
LEDEFKIKEFYKDNPESEDKLLNIDELYANLKDKISHGNYDTLDDILNEISLLNEQDSLD
QDKVCIMSIHASKGLEFDYVFIIGLEEGFFPLTSESSNIEEERRLAYVAITRAKKKLYLS
YANSRFYKGSRARLEKSRFFGESNVMKKELTLDYQSSSYKKGDLIKHKIFGIGRVTSVSK
IGAEEKLTINFGGIERMIMSSFVEKVI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacttcaagggttaaatgatagccaaaaagaagctatcatgcatattgatgga
gctatgcttatattagcaggagcaggtagtggaaaaacaaaaactatcaccactagactt
gcttatttgattgatcatgtgggcattcctgcgcaaaataccctcacactaacctttaca
aataaagctgctagcgtaatgaaaacaagagctttagctcttttaaaagatcaaaattta
cacaatccacttctatgtacttttcataaatttggtttattatttttaaggctttatagt
gaaagaatcaaaagagcaaataattttgttattatcgacactgatgataaaaagaaaatt
ttaaaggatttagcaggtgaaaacataaaaaactcattagcaagcattggagcttatatt
tcaaattttaaaaatcaaagcaaaaatgctgaagaaattcgaaaagaattagaattttta
aaagatgaaaaaagtaaaaactacgaagaaattattcatctttatgagcaatatgaaaat
tttttaatacaaaataattttatggattttgatgatttattaatgcttacaaataaaatt
ttagaagatgaaaattttgctaaagaacaaagcaaaatttatcaatacataacagtagat
gaatatcaagataccaatgctctgcaatatcaaattctaaaaaaactttgtgcgtctcat
gaaaatatctgtgtagtgggtgatgatgatcaaagtatttatggctggcgtggtgctaaa
atagaaaatatcctaaatttcaaagaacaatttaacaatgtaaaattagtcaaactagag
caaaattatcgctcaacaaatgctattttacaagctgcaaacgaacttatagaacataat
agaaaaagattaggaaaaacactaatttgcacaaaggataaaggtgaagaaatagaaatt
ttacaaaatgatgatgaaaaaattgaaagttttaaagtagcaaaagaaatttcaaaactt
ttaaattcaaaagttaatccaagtgaaatagctatactttatagagttaatgcactatcg
cgtgctttagaagaagcatttagcaaagaaaaaattccttttaaactactaagtggaatt
cgcttttatgaaagagctgagattaaagatatcatttcttatttaagattactctcaaat
ttaaatgatgattattcttttaaacgcattatcaaccgccctaaaagaaattttggcaat
gcaagtttagaaaaactagaaaattatgctaaagaaaatcatttatctttgtttgaaagc
ttatgtattttacaaggaagtggattttttagtaaaaaaacagataaagaaatagaaaaa
tttatattaagcatacataaaatcaaagaaaaagaagacttacttggaataattttatct
ttagaagatgaatttaaaatcaaagaattttataaagataatccagaatccgaagataag
cttttaaacatagatgaactatatgctaatttaaaagataaaatttctcatggaaactat
gatactttagatgatattttaaatgaaatatctttactcaatgaacaagatagtttagat
caagataaagtttgtattatgagtatacatgctagcaaaggacttgaatttgactatgtt
ttcattataggtttggaagaaggattttttccactcactagcgaatcaagcaatatagaa
gaagaaagaagacttgcttatgtagcaatcactagagcaaagaaaaaactttatttaagc
tatgcaaattctagattttataaaggaagtcgtgcaagattagaaaaaagtagattcttt
ggtgaaagtaatgtgatgaaaaaagaacttactttagattatcaaagtagttcttataaa
aagggtgatttaattaaacataaaatttttggaataggtagagttacaagtgtaagcaaa
ataggtgctgaagaaaaacttactattaattttggaggcatagaaagaatgattatgtca
agttttgtggaaaaagttatatga
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