Campylobacter peloridis: CPEL_1301
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Entry
CPEL_1301 CDS
T03559
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
cpel
Campylobacter peloridis
Pathway
cpel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPEL_1301 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpel03400
]
CPEL_1301 (uvrB)
DNA repair and recombination proteins [BR:
cpel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPEL_1301 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CPEL_1301 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
Microtub_bd
SWI2_SNF2
Focal_AT
Motif
Other DBs
NCBI-ProteinID:
AJC85114
LinkDB
All DBs
Position
1337907..1339880
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AA seq
657 aa
AA seq
DB search
MFELTSDFKPSPDQKQAIDGIVKSIKAGNKYQTLLGVTGSGKTFTMANIIKNLNMPTLIM
SHNKSLCAQLYSEFKGFFANNHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLR
LSASASLLSYDDVVCIASVSANYGLGNPSEYVGMVLILEANMQIKQKELLKKLVDMGYKR
NDNFFDRADFRVNGDIIDIYPAYYEDEAIRLEFFGDELEAMYHYNVLENKKGKDLKKFIL
YPTSQFSVGEARLKEAIKGIKAELNERLAYFEHENKLVEAQRLKQRVEFDLEMLQSTGMC
KGVENYALHLTGLKSGDTPYTLFDYFAIKNKDFLVIVDESHVSLPQFRGMFAGDRSRKQT
LVDYGFRLPSALDNRPLMFDEFINKNCKFLFVSATPAPLELELSKENVFYQIMRPTGLLD
PKIEIKDSDNQVEILYDEAKKVIERNERVLITVLTKKMAEELSKYYLELGLKVKYMHSEI
DAIERNEIIRGLRSGAFDILIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTALIQTMG
RAARNINGKVLLFAKKITKSMQEAIDTTNERRTLQEAYNKKHNITPSSVKRNLEESLKQD
LEQGEIYRKGKELEKMPAKERAKIVKELRKQMLQAAKNLEFEKAAMLRDEINKLRTL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaactcacaagcgattttaagccaagtcctgatcaaaaacaagccattgatggt
atagtaaaaagcattaaagcaggaaataaataccaaactttactaggcgtaacaggaagt
ggaaaaaccttcactatggcaaatatcattaaaaatttaaatatgcctactttaatcatg
agtcacaataaaagcttatgtgctcaactttacagcgaatttaaaggtttttttgccaac
aatcatgtggaatattttataagttattatgattattaccagccagaagcttatatacca
agaacggatgtttttatagaaaaagatagctctactaatgaagatttagaaagattaaga
cttagtgctagtgcgtctttgctaagttatgatgatgttgtttgtatagctagtgtttca
gcaaattatggcttgggtaatcctagtgagtatgtgggtatggttttgattttagaagct
aatatgcaaataaagcaaaaagagcttttaaaaaaacttgtagatatgggttataaaaga
aatgataatttttttgatagggctgattttagagtaaatggagatattatcgatatatat
ccagcatattatgaagatgaggctattagacttgaattttttggtgatgagcttgaagcg
atgtatcattataatgtcttagaaaataaaaaaggtaaagatttaaaaaaatttatactt
tatccaactagtcaatttagcgtaggcgaagctagattaaaagaagctataaaaggtata
aaggcagaattaaacgaacgccttgcttattttgaacatgaaaacaaactcgtagaagcc
caaagactaaaacaaagagtggaatttgatcttgaaatgctacaaagcacaggaatgtgt
aaaggagttgaaaattatgctttgcacttaacaggacttaaaagcggggataccccttat
acgctttttgattattttgctataaaaaataaagattttttagtaattgttgatgaatct
catgtatctttgcctcaatttcgcggtatgtttgcaggggatagaagcagaaaacaaact
ttagttgattatggttttcgcttaccaagtgctttagataataggcctttgatgtttgat
gaatttattaataaaaattgcaaatttttatttgtttcagcaacccctgcaccacttgaa
ttagaacttagcaaagaaaatgttttttatcaaatcatgcgtccaacaggacttttagat
cctaaaatagaaatcaaagatagcgataatcaagttgaaattttatatgatgaagctaaa
aaagttatagagcgtaatgaaagagttttaatcaccgttttaactaaaaaaatggcagaa
gagctgagtaaatactacttagaacttggcttaaaagtaaaatacatgcactcagaaatt
gatgctattgagcgtaatgaaatcattcgtggtttaagaagtggagcttttgatatttta
ataggcattaatcttttaagagaggggcttgatttacctgaagtttcgctcatagctata
atggatgcagataaagaaggttttttaagaagcactactgcactcattcaaactatgggg
cgtgctgctagaaatataaatggtaaagtattgctttttgctaaaaaaatcacaaaatcc
atgcaagaggctattgatacaaccaacgaaagaagaactttacaagaagcttataataaa
aagcacaacatcactccaagctcggtaaaaagaaacctagaagagagtttaaaacaagat
cttgagcaaggagaaatttatcgtaagggtaaagaacttgaaaaaatgcctgccaaagaa
cgcgctaaaatagtaaaagaattaagaaaacaaatgttacaagcagctaaaaatcttgaa
tttgaaaaagcagcaatgcttagagatgagattaataaattaagaactttataa
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