Chlamydia pecorum PV3056/3: CPE1_0946
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Entry
CPE1_0946 CDS
T02854
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpeo
Chlamydia pecorum PV3056/3
Pathway
cpeo03420
Nucleotide excision repair
cpeo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPE1_0946
03430 Mismatch repair
CPE1_0946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpeo03400
]
CPE1_0946
Enzymes [BR:
cpeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPE1_0946
DNA repair and recombination proteins [BR:
cpeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPE1_0946
MMR (mismatch excision repair)
Other MMR factors
CPE1_0946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_14
SAT
Motif
Other DBs
NCBI-ProteinID:
AGW38413
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All DBs
Position
1078414..1080327
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AA seq
637 aa
AA seq
DB search
MIISAELNDAQLSAVTSPLRPVLVLAGAGAGKTRVVIYRILHLIHQGIAPREILAVTFTN
KAAKELKERIMHQCPQAQYDLPMVCTFHSLGVFILRRSLHLLNRENNFIIYDQGDAEKLI
KRCLQQHNLKQNLVDSMQYHISQAKNRLLSPEDLDPQDYVDPVVTIYKEYQKKLEETNAL
DFDDLLFLTVKLFKTCAEARQEYQELWKALLIDEYQDTNHAQYTMAQIISDQHRNIFAVG
DPDQSIYSWRGANIHNILNFEQDYPQAQVLRLEENYRSYGNILNAANALIQNNASRLKKE
LRSVRGPGEKIRLFLGKTDREEADFVAEEILKIHRKSQIALRNFCIFYRTNFQSRTFEDA
LLRRRIPYEILGGLSFYKRREIQDILAFLRMFSAKNDLIAFERTLNLPKRGLGPAAISSL
NHYALTEGLSLLEACKKTLKTQDVKLSKKQQEGLKDYLSIFQQMEVAYETQPLSEFMISL
LRITQYLNILKEDPDSFEDRKNNLDELISKTFEWEQQNPEGSLEAFLDDLALKSSTDEED
LISDRVNLMTLHNGKGLEFRIAFVVGLEENLFPHANSKGNYENLEEERRLCYVGITRAQD
LLYLTAAQTRFLWGTVRVMKPSRFLKEIPRDYLIHVH
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgataatttctgctgaattaaatgacgcccaactctctgctgttacttccccattacgt
cccgtcttggtacttgcaggtgctggtgctgggaaaactcgtgtggtgatttatcgcatt
cttcacttgatccatcaaggaatcgcccccagagaaattttagcagtaacatttactaac
aaagccgcaaaagaactcaaagagcgtattatgcatcaatgtccccaagcgcaatacgat
ctccctatggtctgtaccttccatagcctcggagtatttatccttagacgctctctccat
ctcttaaatcgggaaaataattttattatctatgatcagggagatgctgaaaaacttata
aaacgctgtctacaacaacacaacctcaaacaaaatcttgttgacagcatgcaataccac
atctctcaagcgaaaaatcgcctactttccccagaggatttagatcctcaagattatgtc
gatcccgtagtgactatctataaagaataccaaaagaaactggaagaaaccaatgcgtta
gattttgatgatttactatttctaacggtaaaactttttaaaacttgcgcagaagcacgc
caagagtatcaggaattatggaaagccctacttatagatgagtaccaagatacaaaccat
gcacagtatactatggcgcaaatcatctctgatcaacatcgaaatatctttgcagttgga
gatcccgaccaatcaatctattcttggcgaggagctaatatccacaatattttgaacttt
gagcaggattatccccaagcgcaagttttgcgcttggaagagaattaccgcagctatgga
aacattttaaacgcagcaaatgctcttatccagaataacgcttcacggttaaaaaaagag
ctacgcagcgtaaggggacctggagaaaaaatccgccttttcctaggaaaaacagataga
gaagaagcagattttgtggcagaggagattcttaagatccatcggaaatctcaaattgcc
ttgagaaacttttgtattttttacaggacgaacttccaatctagaacgtttgaagatgcg
ctattgcgtcggcgaatcccctatgaaattctgggagggttatctttttataaacgccga
gaaatccaagatattcttgccttcctaagaatgttttcagcaaaaaatgatcttatcgct
tttgaaagaactctgaatcttcccaagcgaggtttaggtcccgcagcaatctcttctctt
aatcactatgccctaacagaaggactctccttactagaagcatgcaaaaaaactcttaaa
acccaagatgtaaagctgtcaaaaaaacagcaagaagggctgaaagactaccttagcatc
ttccagcaaatggaagttgcctatgagacacaacccctaagcgagtttatgatctctctt
ttaagaatcacccaatacctgaacatccttaaggaagacccggactcttttgaagatcgc
aaaaacaaccttgatgagctcatttctaaaacttttgaatgggaacagcaaaatcctgag
ggatctctagaagcatttttagatgatcttgcattgaaaagctctacagatgaagaagat
ctcatttctgatcgcgtgaacttaatgactctccataatgggaaaggcttggaattccgc
attgcttttgtcgtaggcttggaagaaaatctttttccccacgcaaactccaaaggaaac
tatgaaaatcttgaagaagaacgaaggctatgctatgtagggatcacacgagctcaagac
ctcctgtacctcacagctgcacaaacccgatttctttgggggaccgttcgagtaatgaaa
cctagcagatttctaaaggaaatccccagggactacttgattcacgtgcattaa
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