Cucurbita pepo subsp. pepo (vegetable marrow): 111776276
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Entry
111776276 CDS
T05351
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Module
cpep_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111776276
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111776276
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
ZirS_C
PI3K_C2
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
111776276
NCBI-ProteinID:
XP_023511455
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Position
LG15
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AA seq
386 aa
AA seq
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MAIPSTPFILLPLFFFFFFSVSSTTFNVVDFGAKPDSKTDMSKAFEAAWTSACRSSAAVT
IYVPKGRFYLSTTTFNGPCSNNEITMHVDGTLVAPSDYGVENWITFRHVDGVSVFGGVLD
GQGAGLWDCKNSHKSCPLGATSLEFSNSKNIIVSGLTSLNSQMFHIVVNGCQNVKMQGIK
ISAAGNSPNTDGIHVALSSQVTIITSSISTGDDCISIGPGTSNLWIENVACGPGHGISIG
SLGKDVEEDGVQNVTVKTATFTNTQNGVRIKTWGKPSKGFARNILFQDIIMNNVQNPIII
DQNYCPNNKGCPGQVSGVEISNVSYQNIHGTSATQVAMKFDCSSKFPCRGITLENVKLSY
KNDVAEASCSNADGTAAGLVQPSSCL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggctattccttcaacccccttcattctcttgcctctctttttcttcttcttcttctcg
gtttcctcaactaccttcaacgtcgtcgattttggagccaaacccgactccaaaaccgac
atgtcgaaggcatttgaggcagcttggactagtgcctgccgttcttcggctgcggtcaca
atttatgttcccaagggaagattttatctctcaactacaactttcaatggcccttgtagt
aataatgaaatcaccatgcacgtcgatggcacgctcgtcgctccctccgactatggcgtc
gaaaattggatcacttttagacatgttgatggagttagtgtctttggtggcgttcttgat
ggtcaaggagctggattatgggattgcaaaaattcacacaagagttgtccccttggagcc
acgtcattggaattttcgaattcaaaaaacataattgtgagtgggttgacctcgctcaat
agtcaaatgtttcacatcgtagtcaatggatgtcaaaatgtaaaaatgcaaggaatcaag
atttcagccgctggcaatagtccgaacactgatggcattcacgtagcgctatcttcacaa
gtcaccataatcacatctagcattagcactggcgatgactgtatttcaataggtcctggc
acgtccaatttgtggattgagaatgttgcttgtggacctggacatggaattagcattggg
agtttaggaaaagacgtggaagaggatggcgttcagaacgtgacagtgaaaacagctacg
ttcaccaatactcaaaatggtgtgagaataaaaacatggggaaagccaagcaaagggttt
gcaagaaacattctttttcaagatattataatgaataacgttcaaaatcctatcatcatc
gaccaaaattactgccccaacaacaaaggttgtccaggacaggtttctggagtcgaaatt
agcaatgtgagttatcaaaacatccacggaacatcagccactcaagttgcgatgaaattc
gattgtagctcaaagtttccatgcagagggataacgctcgagaatgtgaagctgagttac
aagaatgacgtagctgaagcttcttgtagcaatgctgatggaactgctgctggcttagtt
cagccatcaagttgtttgtag
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