Cucurbita pepo subsp. pepo (vegetable marrow): 111776277
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Entry
111776277 CDS
T05351
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Module
cpep_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111776277
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111776277
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
ET
NosD
Motif
Other DBs
NCBI-GeneID:
111776277
NCBI-ProteinID:
XP_023511456
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Position
LG15:complement(2978117..2980046)
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AA seq
393 aa
AA seq
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MALLGTLHAFLSLLLLFFNYALAVGLTFNIVSLGAKSDGKIDVSPVLQTAWTKACDSSKP
TTIYVPKGIFYVRSVSFNGPCKNNAITLLIDGTLVASPNIQVLARTKSWLEFSHINGLSI
VGGVIDGQGTALWDCKRSGKSCPNGAWSLQINDSKNVNITGLSSINSQMFNIVVDGCQNM
HMTGVNVSSAGDGPNTDGIHVQQSSNVTILNSSIGTGDDCISIGLGTSNLWMENITCGPG
HGISIGSLGKGAEEDGVYNVTLISSTFTGTQNGVRIKSWGRPSEGFAIKIHFQRIIMDNV
KNPIIIDENYCPHHKRCPGQASGVKVSNVTYEDITGTSATEIAINFDCSPINHCTGLSLK
DIRLTYENQIAQASCKNAEGTASGVVEPSNCLA
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggctcttcttggaaccttacatgcttttctttctcttctacttctgttttttaactat
gctttggcggttggattaacattcaatattgttagtctaggagccaagtccgacggaaag
atcgatgtctcgcctgtgcttcaaacagcatggactaaggcctgtgactcatctaaacct
accactatttacgttcccaagggaattttctatgttcgaagtgtgagctttaatggacca
tgtaaaaacaatgctattactcttctcattgatggaactcttgtggcttccccgaacatt
caagttctagctagaactaaatcttggcttgagtttagtcacataaatgggctttccatt
gttggcggtgttattgatggacaaggaactgccttatgggattgtaaacgttcagggaag
agttgccccaatggagcctggagtcttcaaatcaatgattcaaaaaacgtaaacatcacg
ggattatcttcaattaacagtcaaatgttcaacattgtggtggatgggtgccaaaacatg
catatgactggagtgaatgtctcgtctgcaggcgatggtccaaacaccgatggcatccac
gtgcaacaatcatcaaatgtgaccatcctcaactcgagcatcggcacgggtgatgactgc
atctcaattggtctagggacttccaacttgtggatggaaaatattacatgtggacctgga
catggaatcagcattgggagtttgggaaagggagctgaggaggatggagtgtataatgtt
acactgatatcatctactttcacggggactcagaatggagtaaggattaagtcctgggga
agaccaagcgaaggattcgctataaaaattcattttcagcgtattattatggacaatgtg
aaaaacccaataataattgatgaaaattattgtccacatcacaaaagatgccctggtcag
gcttccggagttaaagttagcaacgtaacatacgaagacattacgggaacttcagccact
gaaatagcaatcaattttgattgtagcccaataaatcattgcactggattaagtttgaaa
gacataaggctaacttacgagaatcaaatcgctcaagcttcatgtaaaaatgctgaagga
actgcttctggtgtggttgaaccttctaattgcttagcatag
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