Cucurbita pepo subsp. pepo (vegetable marrow): 111776384
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Entry
111776384 CDS
T05351
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Module
cpep_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111776384
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111776384
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
111776384
NCBI-ProteinID:
XP_023511587
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Position
LG15:4370854..4372589
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AA seq
385 aa
AA seq
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MDPRTTSFLLSLLLIIFFNSPFAASETFNVVNFGAKPDAKTDSSKAFQAAWARACTSSTS
ASIYIPNGRFYLRHATFNGPCINHAIDIHIDGTLVAPSDFHVNANSPNWIIFHLVNGVSI
FGGTLDGQGAGLWACKRTAKTCPRGATSLEFTNSKNIMISGLTSLNSHIFHIVVNECHDV
KMEGLKVSASGNSPNTDGIHVGLSSHVTILNSDISTGDDCISIGPGTSNLWIENVACGPG
HGISIGSLGKALKEDGVQNVTVKSCRFMNTQNGVRIKSWGRPSSGFARNIRFQHLKMTNV
KNPIIIDQNYCPHNKDCPGQASGIKVSDVTYQDIHGTTATKFALTFDCSPKFPCVGIRLE
DVKLSYKNGAAKALCSHVRGTVTGC
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcgaacaacctcgtttcttctctcactactactcatcatcttcttcaattca
ccctttgctgcttccgagacattcaacgtcgtcaatttcggagccaaacccgacgccaaa
acagactcgtccaaggccttccaagcagcatgggcgcgtgcttgtacctcttctacgtcc
gcatccatttacatcccaaatggaagattctacctccgccatgcaactttcaatgggcca
tgcataaaccatgccatcgacatacacatcgatggcactctcgtggctccgtcggacttc
catgttaatgccaactctccaaattggatcatttttcaccttgttaatggagtttccatc
tttggtggtactcttgatggtcaaggagctggcttgtgggcttgcaaacgtactgccaaa
acctgccctcgtggagccacgtcgttggaatttaccaattccaaaaacattatgataagt
ggattaacctcattaaatagccacatttttcacatagtagtcaatgaatgccacgatgtg
aaaatggaaggactaaaggtctccgcttctggtaatagtcccaacacggatggtattcac
gtaggcctatcatctcatgtcaccattctcaattcagatatcagcaccggtgacgattgc
atctcaataggccccggcacctccaacttgtggattgagaatgttgcttgtggccctggc
catggaattagcatcgggagtttaggaaaggcgttgaaggaggatggagttcaaaacgtg
acagtaaaatcttgtagatttatgaacactcaaaatggagtgagaataaaaagttgggga
aggccaagcagtgggtttgcaagaaacattcgttttcaacatctcaagatgactaatgtc
aagaatcccatcataatcgatcaaaattactgtcctcacaataaagattgtccgggccag
gcttcgggaattaaagttagtgatgtgacatatcaagacattcatgggacaaccgccact
aaattcgccctgacattcgattgtagtccaaagtttccatgcgtaggaataaggttggaa
gatgtaaaactgagttacaagaatggagcagccaaagctttgtgtagtcacgttagagga
accgttactggttgttag
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