Cucurbita pepo subsp. pepo (vegetable marrow): 111776484
Help
Entry
111776484 CDS
T05351
Name
(RefSeq) RNA-binding protein 28
KO
K14573
nucleolar protein 4
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111776484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpep03009
]
111776484
Ribosome biogenesis [BR:
cpep03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111776484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
111776484
NCBI-ProteinID:
XP_023511705
LinkDB
All DBs
Position
LG15:6369893..6379302
Genome browser
AA seq
985 aa
AA seq
DB search
MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS
TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTAFKS
KTNKEGDTSEREEQTTNEDGDTSKREEQTTNEDGDTSEKEEQTTNEDGDVSKREEQTTLN
SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA
VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL
GGEGSKTQKWKLIVRNLPFQAKEKQIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC
KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEKDREGSISSDD
LEVENAAVHNKSQRSDEDEGSSEDSEKEDISSEIDFEGEAEISRKILENLIASSAKEALP
SLIDGNPPSKVNKEPVLDSSKKSSDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG
NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS
GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNVDHRNLNLAQEGIILEGTPAAEGVSA
SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
VIRQIKFLKDVKKGKVLTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF
AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATGDNRPV
KEKNRNENKNGNHVSNDMAMEESRDRKKRKMRPESGNNTNESQKQKPEGRRSMPEKSSKR
SAPMDTVKIKASQEADVQHKKKAKHQVDQQQRKRAKKNKLPVGQDAVDKLDKLIEQYRSK
FSQKSSDPADGEKKGSKQVRRWFQS
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaacaagaggtttaaggacggtggcgagaagggagccgccgccggcgatcac
tgcccttccaaggttttcgtcaagaacttgccgtactcgttcaccaactcacagcttgaa
gaaacattcagtgatgttggaccggtccggcggtgcttcatggttacgcagaagggttca
actgagcatcgtggttacggattcgtgcagtttgctgtagcagaagatgcgaatcaagca
attcagcagaagaatgggctgtctattgaaggacgcaaaattactgttaaacatgcaatg
catcgagctccccttgagcagcggcggtcaaaagaaaatcaaggtactgcattcaagtca
aaaactaacaaggaaggagatacttctgaaagggaagaacaaacaactaacgaggatgga
gatacttctaaaagggaagaacaaacaactaacgaggatggagatacttctgaaaaggaa
gaacaaacaactaacgaggatggagatgtttctaaaagggaagaacaaacgactttaaat
tctgaggggaggaaagagagacatttgaatgctcagaaattggctccactttctagttat
ctagaggataaagagggttcttcaggaaagcaaaggattgcaaggactgttgtagtcggt
ggtctccttaatgctgatatggctgaagatgttcaccgccaagctagagaagttggtgct
gtatgctctattgtttatcctcttcccagaaaagaagttgaacagcatggccttttacga
gatggatgcaaaatggatgtttcagctgttctttttgctagtgttaagtctgcacgtgct
gctgtgaccatattacatcagaaagagatgcaaggaggtgttgtgtgggcccgccaactg
ggtggggaggggtccaaaactcagaaatggaaacttattgtcagaaatcttccatttcag
gccaaagagaaacaaataaaggataccttttcatctgcaggatttgtgtgggacgtgatg
gtgccacatagttcagacacaggattatcgaagggttttgcgtttgtcaaatttacatgc
aagcaggatgctgaaaatgctattaaaaagttcaatggtcaaaaatttggtaaaaggaca
atagctgtggactgggccattccgaagaagatatatagttcaggtgctaatgctccagtt
gattcagatgaaggggaagagactgaaaaagacagagaaggtagcattagtagtgatgat
ttggaagttgaaaatgctgctgttcataacaaatctcagcgctccgacgaagatgaaggt
tcttcagaggactcggagaaagaagatatttcctcggagattgattttgaaggagaagca
gaaatttcaagaaaaatacttgaaaatctaattgcatcttcggctaaagaagctcttcct
tctctcattgatggtaacccaccatctaaagtgaacaaggagccagttcttgattcatca
aagaagtcatctgatatgtctgataaagtatcaaatgggcccgaaaagttaagtgaaggc
aaaacatctattcttaagccagtagatgaagaggatttgaagagaacagtttatataggc
aatcttccatttgatattaataatgaagaagtgaaacagcggttttctggattcggtgaa
gtactatccttcgtacccgtccttcatcaagttacaaaacgacctagaggcactggtttt
ctcaagtttaaaacggctgatgctgctactgctgctgtttcatctgcgaatgttgcatct
ggtgtcggaatatttctgaaaggcaggcaattgaaagtattgaatgctctagataagaaa
tcagctaatgaaaaggaattggagaagtcaaaaaatgacaacgttgaccaccgaaatctt
aaccttgcacaggaaggtattattctcgagggaactccagctgctgagggtgtttctgct
agtgatatgatgaaacgtcaaaggctagaaaagaaaagaatgactaagcttcaatctccg
aattttcatgtttcaagaactaggctcgttatacacaatttaccaaaatcaatgaaagaa
aaggaacttcaaaaactttgcatcgaagctgttacctcgcgagctacaaagcaaaaacct
gtgattcgccagattaaattcttgaaggatgtgaagaaaggaaaggtactaacaaaaaac
tactcttgtggagttgctttcgtcgagttttctgagcatcagcacgcccttgtagccctg
cgagttctcaacaacaatccagaaacttttggccctgtgaatcgcccgatcgtagaattc
gctgtagacaatgttcagatgttgaagctacggaaagcgaagttacaagcttcgtatcag
gacaatactgccaacgttccgaaatcactgcatcgtaatgccgatacaaatgctggggat
atccattcaaacaagacgaactccagaaaaaggaaagcaacaggcgataatcgtccagtg
aaggagaaaaatcgcaacgaaaacaaaaatggcaatcatgtatccaatgatatggcgatg
gaagaaagtagagacagaaaaaagaggaaaatgcgtccagaaagtggtaacaatacaaac
gagtcacagaaacaaaaaccagaaggacgaagatcaatgcctgaaaaatcgagcaagaga
tcggcacccatggatactgtgaaaataaaagcttcccaggaagcagatgtacaacacaaa
aagaaggcaaaacatcaggtagaccagcagcagaggaagagggcaaagaaaaacaagtta
ccagtaggacaggacgccgttgataagctcgataaacttatcgaacaatatcgatctaag
ttctcgcagaagagttcggatccagctgatggtgaaaagaaaggctctaaacaggttaga
agatggttccaatcataa
DBGET
integrated database retrieval system
