KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111776714
Entry
111776714         CDS       T05351                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111776714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111776714
   03041 Spliceosome [BR:cpep03041]
    111776714
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111776714
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111776714
Spliceosome [BR:cpep03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111776714
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 Tim54 BUD22 Nop14
Other DBs
NCBI-GeneID: 111776714
NCBI-ProteinID: XP_023511803
LinkDB
Position
LG16:complement(621406..624476)
AA seq 496 aa
MARKRKLDSSKSSEPPKKLQQQEAQAVLDESKPLNEPLKEVVAEDLSNYEVVEEEDDADQ
DDDNEGEEEEEEEEEEEEDDEEEEDDEGDANVDNHHQAPDISSSSAAAATTSDDDDEDEP
IPNLLDPFGKDQLINLLCEASEKHADVAERIRTVADADPTHRKIFVHGLGWDTNAETLIS
VFKEYGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKALKEPQKKIGNRMTACQLASVG
PVPTSSAVAAPQGPPASEYTQRKIYVSNVGADVDPQKLLTFFSQFGEVDEGPLGLDKTTG
KPKGFCLFVYKTIESARKALLEPHKNFEGHVLHCQKAIDGPKPGKSQHQHHTQNAPFQRN
KNPNYAGGATSGSGHLMAPAGPGVGYNQGPPQALNPALGQALTALLAGQGAGLGLTNLLG
TIGSTSGLNPVIQGAGPGVQGGYGSQANISPGVMGYGSQSGLQGGYPTQHMGQGGTGRGG
QHGVGQYGGPGGYMGH
NT seq 1491 nt   +upstreamnt  +downstreamnt
atggcaaggaagcgaaagctcgactcctctaaatcctccgagcctcctaagaagctccaa
cagcaagaagctcaagccgtcctcgacgagtccaagcccctgaatgaacccctcaaggaa
gtcgttgctgaggatctttcgaattacgaggtggtcgaggaagaagacgatgccgatcaa
gacgatgataacgagggggaggaggaggaggaggaggaggaggaggaggaggaggatgac
gaggaggaggaggatgatgaaggcgatgcgaatgtcgataaccaccatcaagcccccgat
atttcctcctcctccgccgctgctgcaactacttctgacgacgacgacgaagacgagcca
attccgaatctcttggatcctttcggcaaggaccagcttataaatctgctttgcgaagcg
tcggagaagcatgcggatgtggctgaaaggattcgaacggttgctgatgcggacccgacc
caccgcaagatttttgttcacgggctaggttgggatacaaatgccgaaactttgatcagt
gtgtttaaggaatatggtgagattgaggactgcaaagctgtctgtgataaggtctctggt
aagtccaagggttatggtttcatcctcttcaagaagcgcagtggagctcggaaagctctg
aaggaaccccagaagaagattggcaataggatgactgcctgtcagttggcttcggtcggg
cctgttccaacgtctagtgcggtggcggccccccaaggaccacctgcttccgaatatacg
cagaggaagatttatgtgagcaatgtcggagctgatgttgacccccagaagttgctcact
ttcttttcccagttcggtgaagttgatgaaggaccattggggcttgacaagacgacgggt
aagcctaaaggtttctgtctatttgtgtacaagacgatagaaagtgcgaggaaggcattg
ttggagccccacaaaaattttgagggtcatgtcttgcattgtcagaaggcgatcgacggt
cccaagccagggaagtctcagcaccagcatcatacacaaaatgcgccgtttcagaggaat
aagaatcctaattatgcaggtggggcgacatctggatcgggacacttgatggcgcctgca
gggcctggtgttggttataaccaaggacctccacaagcattgaacccggctcttggccag
gcccttactgctttgctagcgggtcagggtgctgggttgggactgactaatttgttaggg
acaatcggatctacttcagggcttaatccagtcatacaaggcgctggacctggagtacaa
ggtgggtatgggagtcaagcaaatataagccctggagtgatgggatatggaagtcaaagt
ggtttgcagggtggatatccaacccaacatatgggacagggtggaactggaagaggaggg
cagcatggggttgggcagtatggtggtcctggcggttatatggggcactag

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