Cucurbita pepo subsp. pepo (vegetable marrow): 111776748
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Entry
111776748 CDS
T05351
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00100
Steroid biosynthesis
cpep00909
Sesquiterpenoid and triterpenoid biosynthesis
cpep01100
Metabolic pathways
cpep01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
111776748
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
111776748
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cpep01006
]
111776748
Enzymes [BR:
cpep01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
111776748
Prenyltransferases [BR:
cpep01006
]
Terpene biosynthesis
Squalene/phytoene synthase
111776748
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
PhoU_div
Motif
Other DBs
NCBI-GeneID:
111776748
NCBI-ProteinID:
XP_023511854
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Position
LG16:4738379..4744346
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AA seq
417 aa
AA seq
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MGSLGAILRHPDDIYPLLKLKMAARHAEKQIPPESHWGFCYTMLHKVSRSFALVIQQLKP
ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD
EFHHVSTAFLELGRGYQEAIEDITKRMGAGMAKFICKEVETVEDYDEYCHYVAGLVGLGL
SKLFHASKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYADKL
EDFKYEENSVKAVQCLNDLVTNALIHVEDCLEYMSNLKDLSIFRFCAIPQIMAIGTLALC
YNNVEVFRGVVKMRRGLTAKVIYRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRI
EAIQKTCKQSGLLNKRELYAVRSEPMCNLAAIVVLFSLLCIILAYLSAKRLPANQPV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgggggcgattttgagacatccagatgacatttacccgcttctgaaactg
aaaatggctgccagacatgccgagaagcagatcccgccggagtctcattggggattctgc
tacaccatgttgcataaggtctcaagaagttttgctctcgttattcaacagcttaagccc
gagcttcggaatgctgtatgcatattctatcttgttcttcgagccctcgacactgttgag
gatgatacaagcatacaaacagatatcaaagtgcccattctgaaagcttttcactgtcat
atatataaccgtgattggcatttttcatgtggcacaaaggactataaagttcttatggac
gagtttcatcatgtttcaactgcgttcctagaactcgggagagggtaccaggaagcaatt
gaggatatcacgaaacggatgggcgcaggaatggccaaattcatttgcaaagaggtagag
accgttgaagattatgatgaatattgccactacgtagctggacttgtcggactaggttta
tccaagctgttccacgcttcgaagtcagaggatttggcacccgattctctttcaaattct
atgggattgtttcttcagaaaacgaatattattcgagattacttggaggatatcaatgag
attccaaagtctaggatgttttggcctcgtgagatttggagcaaatatgctgataaatta
gaggattttaaatatgaggagaattcagtcaaggccgtgcaatgcctcaatgatttggtc
actaatgctttgatccatgtggaggattgcctagaatacatgtctaacttgaaagatctt
tccatatttcgattttgtgcaatccctcagattatggcaattggaacactagcattatgc
tacaacaatgtcgaagtcttcagaggggtcgtcaaaatgcgtcggggtcttactgcaaag
gtcatttatcgaacgaaaacgatggctgacgtctatggagctttctttgatttctctgtt
atgctgaaggctaaggtcaacagcagtgatcctaatgcttctaaaaccctgagcaggatt
gaggcaatacagaaaacatgcaagcagtcggggctcttgaacaagagggaattgtatgca
gtaagaagtgagcccatgtgcaatctagctgcgattgtcgtacttttcagcctattatgc
atcattctcgcgtatctctccgctaaacgtttaccagctaaccaaccagtatga
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