Cucurbita pepo subsp. pepo (vegetable marrow): 111776757
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Entry
111776757 CDS
T05351
Name
(RefSeq) coatomer subunit alpha-1-like isoform X1
KO
K05236
coatomer subunit alpha
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111776757
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111776757
Membrane trafficking [BR:
cpep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
111776757
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111776757
Exosomal proteins of bladder cancer cells
111776757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
TPR_COPA_B
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Zn_ribbon_19
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
111776757
NCBI-ProteinID:
XP_023511868
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Position
LG16:complement(4688701..4694664)
Genome browser
AA seq
1219 aa
AA seq
DB search
MLTKFETKSNRIKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDVLR
LSQMNADLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHPKQDIIVSNSEDKSIRIWDATKRTGLQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFAISGDSLFYVKDRFLRCYEFSSKKDSQVIPIRRPG
STSLNQSPRTLSFSPTENTVLICSDLDGGCYEFYTIPKDSFGRSDSFQDAKRGLGGSAVF
VARNRFSVLDKSHNQVLLKNLKNEVVKKVPIPITADAIFYAGTGNLLCRAEDRVVIYDLQ
QRIILGDLQTPFVKYVVWSNDMESVALLSKHAIIIANKKLVHQCTLHETIRVKSGAWDDN
GIFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITKVSGSTLFCLDRDGTVRSFSIDATEYI
FKLSLLKKRFDHVLSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYTYQKTKNFDRLSFLYLITGNTAKLSK
MLKIAEVKNDVMGQFHNALYLGDVRERIKILENVGHLPLAYITASTHGLHDVAERLAAEL
GDDIPSLPEGKTASLLLPPTPVMCSGDWPLLRVMKGIFEGGLDNVGGGRADEDDYEVADG
DWGEELEVVDVDGLQNGDVSAILEDGERAEEDEEEGGWDLEDLELPPEADTPKVSVSSRN
SVFVAPTPGLPANQIWIQRSSLAAEHAAAGNFDTAMRLLNRQLGIKNFAPLKPIFLDLHA
GSQTYLRASSSAPIISLAVERGFSESSNANTKGSPALIYSFTQLEEKLKAGYKATTSGKF
AEALRLFLTILHTIPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRRELKDNPVRQME
LAAYFTHCNLQLPHLRLALLNAMTVCYKAKNLASAANFARRLLETNPSIENQAKTARQVL
QAAERNMTDASQLNYDFRNPFVTCGATYVPIYRGQKDVACPYCSSRFVPGQEGQICTVCD
LAVIGADASGLLCSPTQNR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagtttgaaacgaagagtaatagaatcaaagggttgagtttccacagtaag
aggccatggatccttgcaagtcttcacagcggagtgatccagttatgggattaccggatg
ggcacgcttattgatagatttgatgagcatgaggggcctgttcgcggtgttcactttcac
aagtctcagcctctttttgtgtccggaggggatgattataagattaaagtgtggaactat
aagactcatagatgcttatttactcttcttggacaccttgattatatacgtactgtgcaa
tttcaccatgagtatccatggattgtaagtgctagtgatgatcagactattcgtatatgg
aactggcagtctcgtacttgtatctctgtgttgacgggccacaatcactatgtaatgtgt
gcttcattccaccctaaggaagatcttgttgtgtccgcttccctagatcagactgttcgt
gtttgggacattggtgctttgaggaagaagactgtatctccggcagatgatgtcttgcgg
ttgagtcaaatgaatgctgatctatttggtggagttgatgctgttgttaagtatgtcttg
gaaggtcatgatcgaggggttaattgggcagcattccatcctaccctgccgttgattgtg
tctggagctgatgatcgacaagtgaaattgtggcgaatgaatgacacaaaagcgtgggaa
gtggacacactaagggggcacatgaataatgtctcatgtgtgatgttccatcccaaacaa
gatataattgtttccaattcagaggacaaaagcattcgtatttgggatgctacaaaacga
actggacttcagacatttcgtcgagagcacgatagattctggattctcgctgctcatcct
gagatgaatctattggcagctgggcatgacagtggcatgattgtctttaagctggagaga
gaaagaccggcctttgctattagtggtgattctttattttatgtgaaggaccgcttttta
cgctgctatgagttctcctctaaaaaagattcacaggtcatcccgattcgaaggcctggt
tcgactagcttgaatcagagcccaaggaccctttcatttagccctacagaaaacacagtt
cttatttgctcagatctggatgggggatgttatgaattttacaccatacctaaggatagc
tttggtagaagcgatagcttccaagatgcaaagagaggacttggaggatcagcagtgttc
gtggctcggaataggttttctgtgctagataaaagtcacaaccaagtcttgttaaaaaat
cttaagaatgaggttgttaagaaggtccccattcccattactgcagatgcaatattttat
gctggaactggtaatttattgtgtagagcagaggatagagttgttatatatgatcttcaa
cagagaattattcttggtgatctccaaaccccttttgttaagtacgttgtttggtcaaat
gacatggagagtgttgcattgcttagcaaacatgcaattattattgccaacaagaagctt
gttcaccaatgcacacttcatgagacaattcgagtaaagagtggagcatgggatgataat
ggcatttttatttacactacactaaaccacattaagtattgcctccccaatggagatagt
ggtataatcaaaaccctcgatgttccaatatatattacaaaggtttctggcagtactctt
ttttgcttggatagggatggaacggttcgatcgtttagtattgatgcaacagaatacata
ttcaaactctctctcttgaagaagagatttgaccatgtcctgagcatgataaggaactca
cagctctgtgggcaagcaatgattgcatatttgcaacaaaaggggtttcctgaagttgct
cttcactttgtgaaggacgagagaaccaggttcaatttggctcttgagagtggaaacatt
cagattgcagttgcatctgctacagcaattgatgagaaagatcattggtataggctgggt
gtggaggctcttcgccaaggcaatgcaggcattgtggaatatacctaccagaagacaaaa
aattttgataggttatcgttcctttatctcataactggtaacacggcaaaactgtccaag
atgttaaagattgctgaagttaagaatgacgtcatgggtcaatttcacaacgccctttat
cttggtgatgttcgtgagcgcataaagatcttggagaatgttggccacttacctcttgca
tatatcacagcatcaacccatggtttacatgatgtagctgaaaggctagctgctgaattg
ggagatgacattccatctttaccagaaggcaagactgcatccctcctcttacctcctact
ccagtcatgtgcagtggtgattggccacttctgagagtgatgaaaggaatatttgaaggt
gggctggataatgtgggtggaggccgtgctgacgaagatgattacgaggttgcagatggt
gattggggtgaggagctggaagtggttgatgtcgatggcttacagaatggggatgtctca
gcaattttggaggatggggaacgtgcagaagaagatgaggaagaagggggatgggaccta
gaagatttggagctcccacctgaagctgacactccaaaagtatcagtcagttctcgcaat
tcagtttttgtggccccaactcctggcctgcctgccaaccagatttggatacagaggtcg
tctctcgctgcagaacatgctgcagctggtaattttgatactgcaatgaggttgcttaac
aggcaactaggaattaaaaactttgctcctttgaagcccatatttctggatcttcatgct
gggagtcaaacctatcttcgtgcctcatcatctgctcccataatatcattagcagttgaa
cgaggattcagtgaatctagtaatgcgaataccaaaggatcccctgcacttatttacagt
ttcactcagttggaggagaagcttaaagctggttacaaggccacaacatcagggaagttt
gctgaggctcttcgtctttttcttactattcttcataccatccctctgattgttgtcgag
tctaggagggaagtcgatgaggtgaaggagttgatcattatcgttaaagagtatgttttg
ggtttgcaaatggaactgaagagaagggaactcaaggacaatccagtacgtcagatggag
cttgcagcctattttacgcactgcaaccttcaattgccacatttgaggcttgctctatta
aatgccatgactgtctgttacaaggctaagaaccttgccagtgctgcgaacttcgctcgc
agacttcttgagactaacccctcaattgagaatcaagctaagacagccaggcaagtgcta
caggctgcagagaggaatatgacagatgcctcccaactgaattatgactttagaaaccct
tttgtgacctgtggagcgacttatgtgccaatctatcgaggacagaaggatgtcgcttgc
ccatactgtagttccaggtttgtgccaggtcaggaaggtcaaatttgtactgtttgtgat
cttgctgttattggagctgatgcgtctggtttactttgttctcccacccaaaatcgatga
DBGET
integrated database retrieval system
