Cucurbita pepo subsp. pepo (vegetable marrow): 111776800
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Entry
111776800 CDS
T05351
Name
(RefSeq) auxin response factor 4-like isoform X1
KO
K14486
auxin response factor
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111776800
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
111776800
NCBI-ProteinID:
XP_023511940
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Position
LG16:6316008..6322053
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AA seq
783 aa
AA seq
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MEIDLNQTASEEGKNAYCHGNCEEGRCNCCLSSSTSSCSSNSSSTPASSSTYLELWHACA
GPLTSLPKKGNAVVYFPQGHLEQIASASPFSPMEMATFDLQPQILCRVINVHLLANKEND
EVYTQLTLLPLPELLGTGVEGKELEELALNRAADGDGSGGSPTRSTPHMFCKTLTASDTS
THGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFKHIYRGQPRRHLLTTGWS
IFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLTRVVKAV
STKSTFDVFYNPRAYHAQFVVSCQKYVKSINNPVNVGTRFKMRFEMDDSPERRFNGVVVG
IGDMDPFRWPNSKWRCLTVRWDKDSDHQERVSPWEIDPSVSLPPLSVQSSPRLKKLRTSL
QAAPPNNAFNGRGGFMDFEDSVRSSKVLQGQENVGMVSPFYGCDNTAKRSLEFEVRSSAQ
QNQASGGVEKLNIGDYVTSFTGFMESDRFLKVLQGQEICSLRPQTRKPEPSLGVWGKFNL
SDNSFNPFQSPNSSFYHMMSNGARNMHYPRRDIYSTGQAAMMSSNDINFPRESALFNPSA
KMERANSTPPTLGSTMRNSKDENVNENRTGCKLFGFSLTTETATNMQSSGKRSCTKVRKV
HKQGSLVGRAIDLSRLNGYTDLLSELERLFSMEGLLKDPDKGWRVLYTDNENDVMVVGDY
PWHDFCDAVSKIHIYTEEEVEKMTNGVISDDTQSCLDQAALCMEASKSSSVGQPDSSPTV
VRV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgatctgaaccaaacagccagtgaggaggggaagaatgcatattgccatgga
aattgtgaagagggtcgctgcaattgctgtttatcatcttcaacttcttcttgttcctca
aattcttcatcaactcccgcctcttcttcaacctatttggagctttggcatgcttgtgct
ggtcctctcacctcattgcccaagaaaggaaatgcagttgtctatttcccacaaggtcac
ttggagcaaattgcctctgcctctcccttttcccccatggaaatggccacttttgacctc
cagccccagatcctctgcagggtcatcaatgtccacctacttgctaataaggagaatgat
gaggtctacacacaacttactctgcttcccttgccagagttattaggcactggcgtagag
ggcaaagagctggaggaattggcgttgaatagagctgctgatggagatgggagcggaggg
tcgcctactagatccacacctcacatgttctgtaaaacactcacagcgtccgacacgagc
acccatggaggattctctgttcctcgcagagctgctgaagactgtttccctcctctggat
tatactcagcttaggccatctcaagagctaatagccaaggacctgcatggcgtggagtgg
agatttaagcatatttacagaggtcaacctaggcggcatctgctcactactggatggagt
atttttgtaagccaaaagaatcttatttctggggatgcagtgctctttttaaggggcgaa
aatggagagttaaggttgggaataagacgagctgttcggcctagaaatggtcttcctgat
tcaattgtgggcaaccaaaattcttgtgcaaatgatcttactcgtgtggtgaaagcagtt
tccaccaagagcacgtttgatgtgttttacaatccaagggcatatcatgcacaatttgtt
gtctcttgtcagaagtatgtgaagagcatcaacaatccagtgaacgtaggcacaagattc
aaaatgagatttgagatggacgattcgccagaaagaaggtttaatggtgtagttgtcggt
attggcgacatggatccctttcgatggccgaactcgaaatggagatgcttaacggtccga
tgggataaagacagtgatcatcaagaacgcgtttcgccctgggagattgatccttctgtt
tctctcccacccttgagtgttcagtcttctccaaggctgaagaaactgaggactagtctg
caggcagccccacctaataacgcctttaatgggaggggcggttttatggactttgaggat
tcagttagatcctctaaggtcttgcaaggtcaagaaaatgtaggtatggtatcacccttt
tacggttgtgataataccgcaaaacgctcactggagtttgaggtgcgatcttctgcacaa
caaaatcaagcgtcaggtggagttgaaaagcttaatataggtgattatgtaacttctttc
acaggctttatggaatctgatagatttctgaaggtcttgcaaggtcaagaaatatgctca
ttgaggccacaaacaagaaaaccagagcctagtttaggtgtttggggaaagttcaatctc
agtgacaactcttttaacccatttcaatcaccgaactcgagtttttatcacatgatgtca
aatggcgcccgaaacatgcattaccctcgtcgtgatatttacagtactggccaagctgcc
atgatgagctcaaatgatatcaattttccaagagagagtgccttgttcaacccatcagca
aaaatggaaagggctaattctactcctccaactttagggtcgactatgaggaattcaaag
gacgaaaacgtgaacgagaaccgaactggctgtaaacttttcggcttttccttgactaca
gaaactgctacaaacatgcaaagttcagggaagagaagttgtaccaaggtaagaaaggtt
cacaaacaaggcagcctagtaggaagagctattgatctctctagactgaatggttacact
gatcttctttctgaactcgaacgcctgtttagcatggaaggactcttaaaagatcccgat
aaaggatggcgtgtattgtacaccgacaacgagaacgacgtaatggtggtcggggactat
ccatggcatgatttctgtgatgctgtttcgaaaatccacatatacacagaagaagaagtg
gaaaagatgacaaatggagtgatcagtgatgatactcaaagctgcttagatcaagctgct
ttgtgtatggaagcatcaaaatcgtcttcagtgggtcaacctgattcatctccaacagta
gtaagagtttaa
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