Cucurbita pepo subsp. pepo (vegetable marrow): 111776822
Help
Entry
111776822 CDS
T05351
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111776822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111776822
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111776822
03012 Translation factors [BR:
cpep03012
]
111776822
04131 Membrane trafficking [BR:
cpep04131
]
111776822
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111776822
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
111776822
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
111776822
Translation factors [BR:
cpep03012
]
Eukaryotic type
Elongation factors
111776822
Membrane trafficking [BR:
cpep04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
111776822
Exosome [BR:
cpep04147
]
Exosomal proteins
Proteins found in most exosomes
111776822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
SRPRB
FlpD
Motif
Other DBs
NCBI-GeneID:
111776822
NCBI-ProteinID:
XP_023511972
LinkDB
All DBs
Position
LG16:complement(6326776..6329251)
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLIQEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALPEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMIKMVPTKPMVVETFSQYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPSGAKVTKSAVKKGGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagagaagactcacatcaacattgtggtcattggccatgtcgactctgggaag
tctaccaccaccggacacttgatctacaagcttggtggtatcgacaagcgtgttattgaa
aggttcgagaaagaagctgctgagatgaacaagaggtcattcaaatatgcctgggtgttg
gacaaactcaaggctgagcgtgaacgtggtatcaccatcgatattgctttgtggaagttc
gagaccaccaaatactactgcaccgttattgatgcccctggacatcgtgatttcattaag
aacatgattactggtacctcacaggcggattgcgctgttctcattattgattccactact
ggtggttttgaagccggtatttcgaaggatgggcaaacccgtgagcatgctttgcttgcg
tttactcttggtgtcaagcagatgatctgctgctgcaacaagatggatgccaccaccccc
aagtactccaaggcaaggtatgacgaaattgtgaaggaagtttcgtcctacctcaagaag
gttggatacaaccctgacaaaatcccattcgtccccatctctggtttcgaaggagacaac
atgattgagaggtcaacaaacctcgactggtacaagggtccaaccctcctcgaggctctt
gacttgatccaggagcccaagaggccctcggacaagccactccgtcttccactccaggat
gtgtacaagattggtggtattggcactgtacctgttggacgtgttgagactggtgtactc
aagcctggtatggtcgtcacttttggcccatctggattgaccactgaagttaagtctgtg
gagatgcaccatgaagctctcccagaggctcttcccggcgacaatgtcggattcaatgtg
aagaatgttgctgtcaaggatctcaagcgtggtttcgttgcttccaattcaaaggatgat
cctgccagggaggctgccaacttcacatctcaggtcattatcatgaaccacccagggcag
attggcaatggttatgctccagtgctggattgccacacctctcacattgccgtgaagttc
gctgagattctgaccaagatcgacaggcgatctggtaaagaacttgagaaggagcccaag
ttcttgaaaaatggtgatgcgggtatgattaagatggttcccaccaagcccatggtggtg
gaaaccttctcccagtacccacctcttggacgttttgctgtgagggacatgagacagacc
gtggctgtgggagtcatcaagtcggtcgagaagaaggatccaagtggtgccaaggttacc
aagtccgcagtgaagaagggtggaaagtga
DBGET
integrated database retrieval system
