Cucurbita pepo subsp. pepo (vegetable marrow): 111777116
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Entry
111777116 CDS
T05351
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111777116
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
111777116
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Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
111777116
NCBI-ProteinID:
XP_023512334
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Position
LG16:1805204..1812690
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AA seq
626 aa
AA seq
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MGVELENGQAQFQDMEGVNFTDDQLVDFIRGFLTSVSLGNTDGYHQLVGVIHHRDRLSPD
EVALLVTCLKALSGAVSCIDVVLHESLLAAIFKMSLWDYGPNVMDALIELITSLAVSSGK
YVDSCLDMLVTNFMPPHSYKDFLKKPHGLTRKDEVLSRVHTALKDISDLVPLAPLRLELI
VVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRKILTALVDKLLDLDVEIGWDDILQ
DDFSKGIFEIELEDENESTDDIDEDNSELPRELSRKSLGGNVIAETLDSLIVLTFEHLES
CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACALDPEVCGARFSVTLADMFVS
CNGLPLTRMSAISYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTHDVDLNPKAHKIF
YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGRILTHRLSPLKVCLPSIVEEFLRQAK
VANLFTPSETFIFNGLLESEYSKTFGGIERLDMFFPYDPCLLKRCDRYLRPYFVYWSMVR
PTYDEEEEDEGSSDEDVAEVFPDRIEENLMDDEAMARSYDDREFDLDEFDNALDKMSITP
RNSLPFRQDCVRMPSRIRPSMSPESL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggaattggaaaacggccaagctcagtttcaggatatggagggtgttaatttc
acagatgatcagttagttgatttcattagggggtttcttacttcagtgtcgctgggaaat
actgatgggtatcaccagcttgttggtgttatacaccacagagatcgattatcccctgat
gaggttgccttgctcgtgacatgtttgaaggcgctatctggagcagtttcttgtattgat
gtcgttctccacgaatctcttcttgctgcaatttttaaaatgagcttgtgggattatgga
cctaacgtgatggatgccctgattgaactaataacatccctggctgtttcgagtggaaaa
tatgtggattcatgcttggatatgcttgtaactaatttcatgccgccccattcctacaag
gatttcctgaagaagccacatggtcttacaagaaaggatgaagttctttctcgagtgcac
acagctctaaaagacatctcggacttggttcctcttgcacccttgagattagagctcata
gttgtccataaaatgcagagagtatttttcaaggaatctttgaccacgatatatgtggag
aacatgctgaggttggaaaagggtgcaatgagtgaatttgttgggaggaaaatcttaact
gcactggtggataagcttttagatttggatgtggagattgggtgggatgatatcctacaa
gacgatttcagtaaaggaatttttgagattgaacttgaagatgaaaatgaatctacagat
gatattgatgaggataatagtgagcttccaagagaactaagtcgtaagagcttaggtgga
aatgtaattgctgaaacgttagatagcttgatagtgcttacatttgaacatcttgaatca
tgtgaacgtgatggacgattgaatgaggtttttgacattttacttctatcatttcaaaga
actgttctgactgcttacaagtctaaatttgcccagtttgtcatattctacgcttgtgca
ttagatccagaagtttgtggtgcaagattttccgtcacgctagctgatatgttcgtttcc
tgcaatggtcttccccttaccaggatgagtgctatttcatatcttgcgagttatttgtct
cgcgggaagttcctgtcaacctctttggttaccactatattgaaaagattggtggattgg
tgtttagaatatggcaaaacacatgatgttgacctgaacccaaaggctcataaaatattt
tattctggttgccaggccataatgtatgtgctttgctttcggatgagatcgattttggag
ataccgcggctgaagtcgcaacttctgcttatgcctataggtcgaatcttgacgcatagg
ttaagcccactgaaggtttgcctaccgtctatcgtcgaggaatttctccggcaggcaaaa
gttgctaatttatttacaccatcagagacttttatattcaatggtttgctggagtctgaa
tattcaaagactttcggtgggattgaaaggctcgacatgttttttccctatgatccttgc
ttgctgaaaagatgtgacagatatctccggccatattttgtatattggtcgatggttaga
cctacatatgatgaagaagaagaagacgaaggtagcagtgatgaagatgtcgcggaggtt
ttcccggatagaatcgaggaaaaccttatggacgatgaagcaatggcaagaagctacgat
gatagagagtttgaccttgatgaatttgataatgcattagataaaatgtccatcacacca
agaaattctctcccgttcaggcaagattgtgttcggatgccctcacgaatccgaccctca
atgagtccagaatctttgtga
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