Cucurbita pepo subsp. pepo (vegetable marrow): 111777188
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Entry
111777188 CDS
T05351
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111777188
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cpep00535
]
111777188
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
111777188
Meiosis-specific proteins
Cohesin complex and associated proteins
111777188
Proteoglycans [BR:
cpep00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
111777188
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
Myosin_tail_1
ATG14
DUF7491
Motif
Other DBs
NCBI-GeneID:
111777188
NCBI-ProteinID:
XP_023512427
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All DBs
Position
LG16:complement(8560066..8575173)
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AA seq
1203 aa
AA seq
DB search
MHIKQVIIEGFKSYREQVATEPFSSKINCVVGANGSGKTNFFHAIRFVLSDLFQNLRSEE
RHALLHEGAGHQVLTAFVEIVFDNTDNRIPVDKEEVCLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMH
ETSNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYTIYDKELHDARQKLL
EVDEARAKVSETSTKMYNSVLDAHERSKDFDKKLKDLTKEIQGLVKEKEAVEKRRTEAIK
KHTELELDVKDLEEKISGNMRAKEDAGRQLQMLQREIQDSSDELDKISPIYDNQVIEEKE
ISKGIMEREKQLSILYQKQGRATQFASKAARDRWLQKEIDEYERVLSSNMGQEQKLQDEI
DKLNAELHERDAYIERRKMDIATMQSHISESSHGFNTFRAQRDKLQDERKSLWSKESELV
AEIDRLKAEVEKAEKSLDHATPGDVRRGLNSVRRICKEYKISGVHGPIIELLDCDDKFFT
AVEVTAGNSLFHVVVENDEISTQIIRHLNSLKGGRVTFIPLNRVKAPQITYPQSSDVIPL
LKKLKFSSNYAPAFSQVFARTVICRDLDVATKVARTDGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLKFMNIIMLNTKAINMKEDDLAKVRSALQEIDRKITELVSEQQKIDAKQGHDKS
ELEQLKQDIANAQKQKQSISKALLNKEKSLADVRNQIDQLRGNMAVKQAEMGTDLIDHLT
PEEKNLLSRLNPEISELKEKLIACKTDRIETETRKAELETNLTTNLKRRKQELEAIISSA
EADSLLGEADLKRQELKDAKFLVEETTQQLKRVSENMDERSKEVKKIKDEKNKLKTLEDN
YERTLQDEAKELEQLLSKRNVLLAKEEEYSKKIGELGLLSSDAFETYKRRNVKELYKMLH
RCNEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELDAGDEKIQELIGVLDQRKDESIE
RTFKGVAKHFREVFSELVQGGHGYLVMMKKKDGDHADDDPDEAAPPEADTGGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADMANTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVVTKEDALDFIEHDQS
HNN
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgcacataaagcaggttattattgaagggtttaagagctacagagaacaagttgccacc
gaacctttcagttcaaaaataaactgtgttgtcggtgcaaatggatctggcaagactaac
tttttccatgctatacggtttgtgttgagtgacctcttccaaaatttgcggagcgaagag
aggcatgctttgctccacgaaggtgcagggcaccaagttttaactgcttttgtggaaatt
gtgtttgataatactgataaccgtataccagtagacaaggaagaggtgtgcttgcgtcga
acgattgggctgaaaaaggatgagtatttcttagacgggaagcatattacgaaaacagaa
gttatgaatttattggaaagtgctggattttctcgctcaaatccttactatgtcgtgcag
caaggaaagatagcatcattgacattgatgaaggactctgagcgattggatttactcaag
gaaattggtggtactcgagtttatgaggagagaagacgggaaagtttgaaaataatgcat
gaaactagcaataaaagaaagcagataattcaagttgttcagtatcttgatgagagattg
aaagaacttgatgaagaaaaagaagaacttagaaaatatcaacagctggataagcagcga
aaatccctagagtatactatttatgacaaagaacttcatgatgctcgtcagaaacttctg
gaggtagatgaagctcgagccaaggtttcggaaacatccactaaaatgtacaatagtgtt
ctggatgctcatgaaagatccaaggactttgacaaaaaattgaaagacttgaccaaggaa
attcaaggtttagttaaagagaaagaggcagtggagaagaggcgaacagaagctataaaa
aagcacacggagcttgaacttgatgttaaagaccttgaagagaaaatttctggaaacatg
agggctaaggaggatgcagggaggcagcttcagatgctacaaagagaaatccaagattct
tctgacgagcttgacaaaataagtccaatttacgataatcaagtcatagaggagaaggaa
atatcaaaaggaataatggagcgggaaaagcagcttagtattctctatcaaaaacaaggt
cgtgccacccagtttgcaagtaaagctgctcgtgataggtggcttcagaaggaaattgat
gaatatgaacgagtgttatcatcaaatatggggcaggaacaaaagcttcaggatgaaatt
gataagcttaatgctgagctacatgagcgagatgcctatattgagaggcgcaaaatggac
attgcaactatgcagtcccacatatctgagtcatcccatgggttcaataccttcagagca
cagagagacaagctacaggatgagcggaagtcgttgtggagcaaggaaagtgaacttgtt
gctgaaattgataggttgaaagctgaagttgagaaggcagaaaaaagtcttgatcatgct
acgcctggtgatgtaagaaggggactcaattctgttcggaggatctgtaaggagtacaaa
atttctggggtgcatggtccaattattgagttgctcgattgtgatgacaaattttttact
gctgttgaagttactgctggaaacagcctatttcatgtggtggtggaaaatgatgaaata
tcaacccagattatacggcaccttaattctctgaaaggcggaagggttacttttatacca
ctcaacagggtgaaagctccgcaaattacttatccacagagttctgacgtgataccgctg
ttaaagaaattaaagttctcttccaattatgcaccagctttttctcaggtgtttgctaga
acggtgatttgtcgagatttagatgttgccacaaaagttgctcgtaccgatggtttggac
tgtataactttggagggtgaccaagttagtaaaaaaggtggtatgacagggggattttat
gatcaccgacgttcaaaattgaagtttatgaatataattatgttaaataccaaagccatt
aacatgaaggaagatgacctggcaaaagttagatcagcacttcaagagatagacagaaaa
attactgaacttgtttcagagcagcagaaaattgatgccaagcagggtcatgataaatcg
gaattggaacagcttaagcaagacattgctaatgctcaaaagcagaaacaatcaatatcc
aaggctcttctgaataaggaaaaatcgcttgcagatgttcgtaatcagattgatcagctt
agaggtaatatggccgtgaaacaagctgaaatgggcactgatctcattgatcatttgaca
ccagaggaaaaaaatcttctatcacgattgaaccctgaaatatcagagctgaaagagaag
cttattgcatgcaagacagatcgtattgagactgaaacaaggaaagcagagcttgagacg
aatctaacaactaacctcaagcggcggaaacaagagttagaagctataatatcatctgca
gaagcagactctttactgggagaagcagatttgaagagacaggaactgaaagatgccaag
ttcttggtagaagaaacgactcaacagcttaaaagagtttctgaaaatatggacgagaga
tctaaggaagtcaagaagattaaagacgaaaagaataaactaaagactttagaggacaac
tacgagaggacacttcaggacgaagctaaagaattagagcaactactaagcaaaagaaat
gttcttcttgctaaagaagaagagtattcaaagaaaattggagagctggggctactgtca
tctgatgcttttgaaacgtataagaggaggaacgtcaaggaactgtataaaatgttgcac
agatgcaatgaacaactgcagcaattcagccacgttaataagaaagcattggatcagtat
gtgaatttcacagaacaaagggaagagcttcagaaaagacaagctgaattagatgcaggt
gatgagaaaattcaagagctcataggagtcttagatcaaaggaaggatgaatcaattgaa
cgtacattcaaaggagttgcaaagcactttcgagaagttttctcagagcttgttcaaggt
ggccatgggtatctagttatgatgaagaaaaaggatggtgatcatgctgatgatgatcct
gatgaagctgcacctccagaagcagatactgggggcagggttgagaaatacatcggagtg
aaagtgaaggtttcttttactgggcaaggagagacacagtccatgaagcagttgtctggg
ggacaaaaaactgttgttgctctaacccttatctttgccatacaacgatgtgatcctgct
ccgttttacctgtttgatgagatagatgctgcattggatccacagtatagaactgcagtc
ggaaatatgattcgtaggctagcagacatggcgaatactcaatttataacaactacattt
aggccagagcttgtgaaggttgccgacaagatatatggtgttacccataaaaatagggtg
agccgtgtgaatgttgtcaccaaggaagatgccctggactttattgagcatgaccaatct
cacaataactaa
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