KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111777189
Entry
111777189         CDS       T05351                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111777189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111777189
Spliceosome [BR:cpep03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    111777189
 Complex B
    111777189
 Complex C
   U2 SnRNP specific factors
    111777189
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Endotoxin_M
Other DBs
NCBI-GeneID: 111777189
NCBI-ProteinID: XP_023512431
LinkDB
Position
LG16:complement(1977259..1981780)
AA seq 810 aa
MLGSFGPILTLPAPSEDSKPTVQDEQDEIINDHEVDKDKTNSAPVSVATHTKTIGIIHPP
PDIRSIVDKTSQFVAKNGPEFEKRIIANNAGNVKFNFLNPSDPYHAYYQHRLSEFRAQNQ
SSAQQPSQAADSTAPALAPSGPAADSNETVAAKPDVSALFKPVRKVLEPPEAEQYTVRLP
EGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADAYS
KVLMPPKGLTEKLKKSVTDMTTVLERCVHRLEWERSQEQARQKAEDEIEQERIQMAMIDW
HDFVVVEAIDFADDEDEDLPPPMTLEEVVRRSKITVAEEEIVEPGKEMEMDMDEEEMQLV
EEGMRAARLGENDNDKNDMKVDEEPEPPMRIVKNWKRPEERIPAERDHTKFVVSPITGEL
IPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTE
EEVSNAVKAEIEKKKDDQPKQVIWDGHTGSIGRTANQAMSQNLVGEDPNDTTYNDARNLP
GPAALPPKPGVPSVRPLPPPPGLALNLPSMPPNAHYSNPITGLPVHQPQPPVISMIPSVQ
PPPPAMPGQQSYFMNRPPSIPPPMSMNAPNMSVPPPPGSQFTPMQVPRPFVPLPAPPPMN
SMMPPPPMPQGVPPPPMPQGSLPPLPPDEAPPPLPDEPEPKRQKLDDSLLMPEDQFLAQH
PGPIRITVSVPNLDDGNLKGQVLEITVQSLSETVGSLKEKIAGEIQLPANKQKLSGKPGF
LKDNMSLAYYNVGAGEALSLSLRERGGRKR
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgcttggctcatttggaccaatcttgactcttccagctccatccgaggattcaaaacct
actgttcaggatgagcaggatgaaattattaatgaccatgaagtggataaagacaaaacc
aactctgcaccggtatcagttgcaactcatactaaaactattggtatcatacatcctcct
ccagatatccgaagcatcgttgataaaacttcacaatttgttgcgaaaaatggaccagaa
tttgagaagaggatcattgcaaataatgccggtaacgtcaagtttaatttcttgaatccc
tcagatccctaccatgcatactatcagcataggttgtctgagtttcgtgctcagaatcaa
tcatctgcacagcagccttcacaggctgcagattctactgcacctgcgttagccccatct
ggtcctgctgctgacagcaatgaaacagtggcagctaagcctgatgtttctgccttgttc
aaacctgtacgcaaagttctcgagcctccagaggctgagcagtatactgtccgtcttcct
gaaggtatcacaggggaagaattggatattatcaagctgacagcccaatttgttgctcga
aatgggaaatcattcttgacaggattgacgagtagagagattaacaatcctcagtttcat
tttctgaaacctactcatagtatgttcatgtttttcacctcacttgcggatgcatattcc
aaagtgctaatgcctcctaaggggttgactgagaaactgaagaagagtgttactgacatg
acgacagtgcttgagagatgtgtgcatagacttgagtgggaacgttcacaagagcaggca
aggcaaaaagctgaagatgagattgagcaggaaaggatacagatggctatgattgattgg
catgattttgtcgtggttgaggcgatagactttgcagatgatgaggatgaagatttgccc
ccaccaatgactcttgaggaggtagttagaagaagcaagattacggttgctgaggaagaa
attgttgagcctgggaaggagatggaaatggacatggatgaggaagagatgcaactggtt
gaagagggtatgcgggctgctcggttaggagaaaatgacaatgacaagaatgatatgaag
gtagatgaggagcccgagccaccaatgagaattgtaaagaactggaagagacctgaagag
agaatccctgcagaaagagatcatacgaaatttgttgtctctccgatcacaggtgagcta
attccaatcaatgagatgtctgaacatatgaggatttcacttatcgatccgaagtacaaa
gagcaaaaggaaagaatgtttgccaagattcgggagactacacttgctcaggatgatgag
atctcacgaaatatagttggactggcacgaactcgtcctgatatatttggtaccactgag
gaggaggtatcaaatgcagtcaaggcagaaattgaaaagaagaaagacgaccaaccgaag
caggtcatatgggatggccatactggaagcattgggcgtacagcaaatcaagctatgtca
cagaatcttgttggagaggatccgaatgatactacttacaacgatgcgaggaaccttcct
ggccctgcagctctgccacccaaacccggagtgccatcagttcgtcctctcccgcctcca
cctggactcgccttgaatcttccttccatgcctccaaatgcacactattctaacccaatt
actggacttcctgtacaccaaccacagccgcctgttatctcaatgattccatccgttcag
ccaccacctcctgcgatgcctggacaacaatcatatttcatgaatcgtcccccatctata
cctccaccaatgtctatgaatgcaccaaatatgagtgtcccaccaccacctggatctcag
ttcactcccatgcaagttccacggcctttcgtccctctccctgcccctccacctatgaat
agtatgatgccacctccccctatgccacaaggggttcctccaccacctatgccccaaggg
tcgctgcctcccttaccacctgacgaagctcctccaccgcttccagatgaacccgagcca
aagagacagaagctggatgattctttgcttatgcccgaagaccagtttctggcacaacat
cctggacctatccgtatcactgtatctgttcctaatcttgatgatggaaatctgaaaggc
caagttctggagattactgtgcagtccctttctgaaactgttggaagtttaaaagagaag
atagcgggtgagatccagcttccagcaaacaaacagaaactgagtggaaaacctgggttt
ctgaaggacaatatgtcgcttgcttattacaacgttggagcaggtgaagcgctttccctg
tctttaagggaacgtggtggtagaaagagatga

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