Cucurbita pepo subsp. pepo (vegetable marrow): 111777199
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Entry
111777199 CDS
T05351
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111777199
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpep01002
]
111777199
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111777199
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111777199
Peptidases and inhibitors [BR:
cpep01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111777199
Ubiquitin system [BR:
cpep04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111777199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Nitroreductase
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
111777199
NCBI-ProteinID:
XP_023512446
LinkDB
All DBs
Position
LG16:8577892..8593108
Genome browser
AA seq
1118 aa
AA seq
DB search
MTVMTPAPVDQQEDEEMLVPHSDLAENNHQPMEVVPQSESGNTVENQPVEDPPSSRFTWR
IDNFTRLNIKKLYSEIFIVGGYKWRILIFPKGNNVDHLSMYLDVADSASLPYGWSRCAQF
SLGVVNQIHNKYSVRKDTQHQFNARESDWGFTSFMPLSELYDPTRGYLVNDTLIVEAEVL
VRRVVDYWTYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSA
SIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGT
VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE
GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD
RENGKYLSPEADRTVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSEQWYKFDDERVTKED
VKRALEEQYGGEEELPQTNPGFNNAPFKFTKYSNAYMLVYIRESDKDKVICNVDEKDIAE
HLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLVEQIGKDIFFDLVDHDKVRSFRI
QKQMPFNLFKEEVAKEFGIPIQFQRYWLWAKRQNHTYRPNRPLTSMEEAQSVGQLREVSN
KVHNAELKLLLEVEYGLDSRPITPPDKTKDDILLFFKLYEPEKEELRYVGRLFVKGNGKP
FEILTKLNEMAGYAPEEEIELYEEIKFEPNIMCEPIDKKFTFRASQLEDGDIVCFQKSTP
VENVEQYRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLEMSKLYTYDDVVERLAQQLG
VDDPSKIRLTSHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQG
LKTLKVAFHHATKDEVVIHTIRLPKQSTVADVINDLKTKVELSHPDAELRLLEVFYHKIY
KVFPPNEKIENINDQYWTLRAEEIPEEEKNLGPNDRLIHVYHFTKDTAQNQMQIQNFGEP
FFLVINEGETLADIKLRIQKKLEVPDEEFAKWKFAFLSLGRPEYLQDTDIVSNRFQRRDV
YGAWEQYLGLEHTDNAPKRAYTANQNRHTFEKPVKIYN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgatgactcccgctcccgtcgatcaacaagaggacgaggagatgcttgtaccg
cactcggatttggctgagaataatcaccaacctatggaagttgttccacaatccgaatca
ggaaacaccgtagagaatcaacctgttgaggatccaccatcgtcaagatttacatggaga
attgacaacttcacgaggcttaacataaagaagctgtattctgaaatctttattgttggt
ggatataaatggcgcattcttattttcccaaaaggaaacaatgtagatcatctgtctatg
tatttggatgttgctgattctgcaagtttgccgtacgggtggagcagatgtgctcaattc
agcttgggtgtcgtcaatcaaattcacaacaaatattcagtgagaaaagatacacaacat
cagttcaatgcaagggaaagtgattgggggttcacgtcattcatgcccctcagtgaattg
tatgaccctaccagaggatatcttgttaatgataccttaatagttgaagctgaggtcctt
gttcgaagggtggtcgattattggacatatgattcgaagaaagaaacaggttttgtcggt
cttaaaaatcagggagcaacatgttatatgaattcacttcttcaaactctttaccacatt
ccatatttccggaaggctgtgtaccatatgcctactacagaaaatgatatgccatctgca
agcatccctttagctctgcagagcttattttataagctccaatacagcgacagcagtgta
gcgacaaaagaacttaccaaatcttttggatgggacacatatgattcttttatgcagcat
gatgtccaggaactgaacagagttctatctgaaaaacttgaagataaaatgaagggaact
gtcgtggagggaaccatacagaaattgtttgaagggcatcatatgaattacattgaatgc
ataaacgtggactataagtcaacaagaaaggaatcattttatgatcttcagcttgatgtc
aagggctgtcgtgatgtgtatgcttcttttgacaagtatgtagaagtagaacgccttgag
ggtgataacaagtatcatgcagaacaatatgggttgcaggatgctaagaagggcgtattg
ttcattgacttcccccctgttcttcaactccagttgaagcgatttgagtatgacttcatg
cgggacaccatggtaaagatcaatgatcgatatgaatttcctcttcaactggaccttgat
cgagaaaatgggaagtatttatcaccagaagctgatagaactgtccggaatctttacaca
cttcatagtgttttggttcacagtggtggggtgcacggtggacattattatgcctttatc
aggccaaccctttcagagcaatggtacaaatttgatgatgagcgggtaacaaaagaagat
gtaaaaagggcactagaggagcaatatggtggtgaggaagagttgcctcagacaaatcct
ggattcaacaatgctccttttaagttcaccaaatactcaaatgcatacatgctcgtgtat
atacgtgaaagtgacaaggacaaagtcatttgcaacgtggatgagaaggatattgccgaa
catctcagggaaaggttgaagaaagaacaagaagaaaaggaacacaagaagaaagaaaag
gcagaggcacacctttatactatcataaaggttgctagagacgaagatctagttgagcag
attggaaaagatatattttttgatcttgtggatcatgacaaagtaaggagcttccgcatc
cagaagcaaatgccatttaaccttttcaaggaggaggtggctaaggaatttggtataccc
atccagtttcaacgatattggctgtgggcaaagcgtcagaaccatacttatcggcccaac
cgaccattgacatctatggaggaagcacaatccgttggacaattaagagaggtatcaaat
aaggttcacaatgctgagttgaagttattactggaggtggaatatggactggattcacgg
cctattactccaccagacaagacaaaagatgatatcttattgttttttaagctttatgag
cctgagaaagaagagctgagatacgtgggaagactttttgtgaagggtaatgggaagcct
tttgaaatattgacgaaattgaatgaaatggctggttatgctccagaagaagagattgaa
ctttatgaggaaatcaagtttgagccgaacattatgtgtgaacctattgacaagaaattc
acatttcgagcaagtcagctggaagatggagatattgtttgctttcaaaaatccactcca
gttgaaaatgtagaacagtatcgttatcctgacgttccatcatttttggagtatgtgcat
aaccgtcaagttgttcattttcgatccctagagaagccgaaggaagatgatttttgtctg
gagatgtcaaaactttatacatatgatgatgtggtcgaaagactagcccaacaacttggt
gtagatgatccatcaaaaattagattaacgtcacataattgttactctcagcaacctaaa
cctcagccaatcaagtatcgtggtgtggagcatttatctgatatgctggtccattataat
cagacgtcagatatattatactatgaagtattggacatccctcttccagagttacaaggt
ctgaaaactcttaaagtagcatttcatcatgcaactaaagatgaagttgttattcataca
ataagattgccaaaacagagcactgtagcagatgtgattaatgatcttaaaacaaaggtt
gaattatctcatccagatgcagagctcagattgcttgaagttttctatcataagatctac
aaggtgtttcctcctaatgaaaagattgagaacattaatgatcaatattggactttgcgg
gcagaagagattccagaagaagaaaaaaaccttggtccaaatgatcgcctaatccatgtg
taccatttcactaaagacactgctcagaatcagatgcaaattcagaacttcggcgagccc
tttttcttagtcataaatgagggagagactctggccgacattaaattgagaatacagaag
aagttagaggttccagatgaggaatttgccaagtggaaatttgcatttctttcactaggt
cgtccagagtatctccaagacacagacatcgtgtcaaatcgttttcagagaagagatgtt
tatggtgcgtgggagcaatatcttggactggaacacactgacaatgcacccaagcgagcg
tacacagccaatcagaatcgtcatacatttgagaagccagtaaaaatctacaattag
DBGET
integrated database retrieval system
