Cucurbita pepo subsp. pepo (vegetable marrow): 111777255
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Entry
111777255 CDS
T05351
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase 1-like isoform X1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111777255
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111777255
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111777255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_11
zf-C3HC4_3
zf-C3HC4
zf-ANAPC11
PHD_NSD
DUF2921
zf-RING_UBOX
zf-RING_16
zf_RING_Vps8
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
111777255
NCBI-ProteinID:
XP_023512545
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All DBs
Position
LG16:complement(7663050..7673483)
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AA seq
579 aa
AA seq
DB search
MVGREGFGCSAFRRGGFGYFSRTVFAFWVVHILVSQPVDGLRPLRERARSWGDEWLLVRK
DKNDLGPFSEWNITGTYRGSWSFQDSTNNSSRFPDFRNSNGNSIIELISTPTKISGVHYV
QGVVIFHDVIGNEHDVGGVQIKIEGVYIWPFRQLRMVANSGKGGEYKQEVDSILSNPYHL
ARLPSSRINLGVFSSQVFQESPQENMWRRSHSPMYEMEKHCNIEIAAQISHSSSAQNVNG
EHDHYHIEGLMESPAVDDDGDCFSPLVLNGTSVNIEIYYNKAVNYTLMVTFISFLQVLLL
IRQMEHSNTQSGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVF
SIFEMRYLLAIWKASRPMNNGEGWETMRRELSVLYSRFYGILLGGIFLMYELHHFLRPIL
LLMYSFWIPQIVTNVIRDSRKPLHIYYILGITITRLAIPLYVFGCPHNFMRIQPDKTWCI
CLGVFTFLQVAILLLQHYFGSRWFIPRQILPEKYSYYRRLDQNGNHATDCVICMTTIDIS
RPNDCMITPCDHFFHSGCLQRWMDIKMECPTCRRLLPPA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccgagaaggttttggttgttcggcgttccggagaggtggatttggatatttt
tctagaactgtttttgctttctgggttgttcatattttggtttcccagcctgtggatggt
ctcagaccattgcgggagagggctcgatcatggggcgacgagtggttgttagtaagaaaa
gacaagaatgatttgggtccattttctgaatggaacattacaggaacatatagaggtagt
tggagttttcaagactccacaaataactcttccaggtttccagatttcagaaattccaat
ggcaattcaatcattgaattaattagtacaccaaccaaaatatctggtgtacattatgtt
cagggagttgtcattttccatgatgtaattggtaatgaacatgatgttggtggagttcaa
attaagattgagggtgtatatatttggccttttagacagcttcgaatggtagctaacagc
ggaaagggaggagaatataaacaagaagttgacagtatcttatcgaatccgtatcatctg
gcaagacttccttcttcaaggataaatcttggagttttctcctcccaggtgttccaagaa
tctccacaggagaatatgtggagaagaagccactcaccaatgtatgaaatggagaagcat
tgcaatatcgaaatagcagctcaaatatcacattcctcttctgcacaaaatgtaaatgga
gaacatgaccattaccatattgaaggactaatggagagtcctgcggtagacgacgatgga
gattgcttttcgcccttggtattaaatggcacttctgtcaacatcgagatctactacaac
aaagcagtgaattataccttgatggtcacttttatctctttccttcaagtacttctctta
attcggcaaatggaacatagcaacactcaatctggtgctgccaaagtttcgatactaatg
atcgggcaacaggcaattatggacgcttatctatgtcttctgcatctgacagcaggaata
ttagtcgaatccttatttaatgcttttgcaactgctgcatttttcaagttcgttgtgttc
tcgattttcgagatgagatatcttcttgcaatatggaaagccagtaggccaatgaacaat
ggcgaaggttgggaaaccatgagacgcgaactgtcggttctatatagccgtttctatggc
attcttttgggaggcattttccttatgtacgagttgcatcatttcctgagaccgattctt
ctcctcatgtactccttttggatacctcaaatagtcacgaacgttattcgcgactcgaga
aaacctttgcatatatattatatcttaggaataactataactcgacttgctattccatta
tacgtcttcggctgcccccacaatttcatgcgtattcagcctgataaaacttggtgcatt
tgtttgggtgtctttacttttctccaagtagccattcttcttcttcagcactattttgga
tcccgctggttcatcccccgtcagattctacccgagaaatatagctactaccggaggtta
gatcaaaatgggaatcatgctacagattgtgtcatttgtatgaccaccatagatatttca
cgccctaacgactgcatgattactccatgtgatcatttcttccattctggttgcttacaa
agatggatggatataaagatggaatgcccgacgtgtcgccgtctgctgccgcctgcctga
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