Cucurbita pepo subsp. pepo (vegetable marrow): 111777315
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Entry
111777315 CDS
T05351
Name
(RefSeq) long chain acyl-CoA synthetase 2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00061
Fatty acid biosynthesis
cpep00071
Fatty acid degradation
cpep01100
Metabolic pathways
cpep01212
Fatty acid metabolism
cpep04146
Peroxisome
Module
cpep_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
111777315
00071 Fatty acid degradation
111777315
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111777315
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cpep01004
]
111777315
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111777315
Enzymes [BR:
cpep01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
111777315
Lipid biosynthesis proteins [BR:
cpep01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
111777315
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of breast milk
111777315
Exosomal proteins of breast cancer cells
111777315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
111777315
NCBI-ProteinID:
XP_023512617
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Position
LG16:complement(4348624..4356736)
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AA seq
666 aa
AA seq
DB search
MTMPTAYTVAVEDATPESGGKPSGGPVYRSIYAKDGLLQLPTGFESPWQFFSDSVKRNPG
NRMLGRRQTNGDSKAGSYVWLTYQEAYDAAIRMGSAIRKCGVNPGDCCGIYGSNCPEWII
SMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKLASIFSCLPRCSTQLKTI
VSFNNVSSVHKKEAEELGVSCYSWEEFYQLGSLDCELPSKLKTNICTIMYTSGTTGEPKG
VILNNAAIMAEVLSVDHILLLTDKVATEEDSYFSFLPLAHVYDQIMETYCIYKGSSIGFW
RGDIRFLLDDIQELKPTIFSGVPRVYDRIYSGILNKVSSGGSLRKMLFDYAYNYKLGYLS
KGVPQEKAAPLLDKLVFDKIKEAFGGRVRLFLSGAAPLPRHVEEFLRVTSCATLSQGYGL
TESCGGCLTSIANVFTMMGTVGVPVTTIEVRLESVPDMGYDALSSTPRGEICLRGSTLFS
GYHKRQDLTEDVLIDGWFHTGDIGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENIENIFL
QCPLITSIWVYGNSFESFLVGVAVPDQKALEDWARNHNVTGDFKSLCENLNARKYILDEL
NSNGQKHHLRGFELLKAIHLEPYPFDMERDLITPTFKLKRPQLLKYYKERIDQLYEEAKK
AAKPIS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgccgacggcgtacacggtggccgtggaggatgcgacgccggagagcggcgga
aagccgtcgggggggccggtttaccggagcatctacgctaaagatgggcttctccagttg
ccgactgggttcgaatctccatggcagttcttcagcgattccgtcaagaggaatcctggt
aaccggatgcttggtcgtcggcaaaccaacggcgattccaaggcgggttcctatgtatgg
ctcacgtatcaagaagcgtacgatgctgcaatccggatgggttctgctattagaaagtgt
ggcgttaatcctggagattgctgtggtatatatggatccaattgccctgaatggataatt
tcgatggaggcctgtaatagccaagctatcacttatgtacctctgtatgatacactaggt
gctaatgctgtcgaattcatcattaaccatgctgaagtttcaattgcttttgttcaggaa
aacaaacttgcttctatcttttcatgccttcccaggtgttcgactcaattaaaaactatt
gtcagttttaacaatgtttcaagcgtacataagaaggaagccgaagaactgggagtatct
tgctattcttgggaggagttctatcagttgggaagcttggactgtgagctcccttcaaaa
ctgaagaccaatatctgcacaataatgtatacaagtggaaccaccggggaaccaaaaggt
gttatcttaaataatgcagctataatggccgaagttttgtctgtggaccacatactttta
ttgacagataaagtggcgacagaagaagattcatatttctcatttcttcctctagcccat
gtgtatgatcagataatggagacctattgcatctacaagggttcatctatcgggttttgg
cgtggggacattaggtttctgctggatgatattcaggaactgaagccaacaatattttct
ggagttcctagagtctatgatcgtatttattctggtattctgaacaaagtttcgtccgga
ggtagtttgcggaagatgttattcgattatgcatacaattacaagctaggatatctgtcg
aagggtgtgccccaggaaaaagctgcacctctcttggacaagcttgtatttgacaagata
aaagaagcatttggtggaagagttcgtctttttttatctggtgctgcacctttgcccagg
catgtggaagagttcttgagggttaccagttgtgcaactttaagccaaggatatggcctt
acagaaagttgtggtggatgtcttacatccatagccaatgttttcaccatgatgggaact
gttggagttccagttactaccattgaagtaaggctcgagtcagttcctgatatggggtat
gatgcactgtcaagcacgcctcgtggagagatttgcttaaggggaagtactttgttctct
ggatatcataaacggcaagatctaacagaagatgttcttattgacggatggtttcataca
ggggacattggcgaatggcagcctgatggatcgatgaaaataattgatcggaaaaagaat
atatttaagctgtcccagggggagtatgttgcagtggagaacatcgaaaacatattcttg
caatgccctctgattacctcgatttgggtctatggaaatagtttcgagtcatttcttgtg
ggtgtggcggttcccgatcagaaggccttggaggattgggcacggaaccataatgtgact
ggtgactttaaatctttgtgtgagaatctcaatgcaaggaagtatattttggatgagctc
aatagcaatggtcagaagcaccatcttcgaggatttgagctattaaaagcaattcatttg
gaaccatatccctttgacatggagagggatctgataactccaacatttaaattgaagaga
ccacagctgcttaaatactacaaggagagaattgatcaactatatgaagaggcaaagaag
gcagcaaaaccgataagttaa
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