Cucurbita pepo subsp. pepo (vegetable marrow): 111777404
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Entry
111777404 CDS
T05351
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111777404
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111777404
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111777404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-C3HC4_2
zf-C3HC4_3
Prok-RING_1
zf_RING_Vps8
zf-ANAPC11
FANCL_C
Prok-RING_4
EHMT1-2_CRR
zf-RING_16
zf-RING_4
RINGv
PHD_NSD
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
111777404
NCBI-ProteinID:
XP_023512749
LinkDB
All DBs
Position
LG16:complement(5310889..5312660)
Genome browser
AA seq
154 aa
AA seq
DB search
MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLSSPTLPSSPDSIENASE
SIEFHLNPNGSYIEEFRSRIPAILFNKVHSCKLLEHDCSVCLTQFAPDSEINHLSCGHLF
HRVCLEKWLDYWNLTCPLCRTPFMPEEDTASCFW
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgtccagccttcctgctccttctgaaggagtactgggtgtgatccttgtaaat
acggccctatcaatatctatcttcaaaggcatagttcgatcgattctccatgttgttggc
atccatctctcgtcgcctacattaccatcctcaccagattccattgagaatgcttctgaa
tccatagaattccatcttaacccgaacggaagttacatcgaagagttccgcagccgaatc
ccagcaattctgtttaacaaagttcacagctgcaaattgctagaacatgactgctcggtc
tgcctaacccagtttgcacctgattcagagataaaccatttatcttgtggtcatcttttc
catagagtgtgcttggaaaagtggctggactactggaaccttacgtgtcctctgtgtcga
actccgttcatgcccgaagaagacacagcttcctgcttctggtga
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