KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111777434
Entry
111777434         CDS       T05351                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    111777434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cpep03009]
    111777434
Ribosome biogenesis [BR:cpep03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    111777434
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WD40_Gbeta Utp13 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_WDR41 WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_DCAF12 WD40_RFWD3 WD_LRWD1 Beta-prop_WDR75_2nd Beta-prop_VPS8 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_ACSF4 WD40_like Beta-prop_NUP159_NUP214 Beta-prop_NOL10_N Beta-prop_IFT140_2nd DUF4770
Other DBs
NCBI-GeneID: 111777434
NCBI-ProteinID: XP_023512801
LinkDB
Position
LG16:complement(4129240..4139714)
AA seq 884 aa
MATPPFKKNYRCVPFLQQFYEGGAFVVSSDASFIACACGDSIKIVDADTAAIRSTVEGGE
SEVFTALALSPNDKLLFSAGHSRQIRVWDLSTMKCVRSWKGHDGPVMGMTCHLSGGLLAT
AGADRKVLVWDVDGGFCTHYFTGHKGVVSSILFHPDPNKQLLFSGSEDGSVRVWDLMSKK
CIATLGHESTVTSFAISEDGWTLLSAGRDKVVNVWNLRNYTCKKTVLTYEVLEAVLVIKS
GSDFASCVGSLSQKRKETSVSSEIYFITVGERGVVRLWSSESAVCLFEQKSSDVSTKMDE
QNRGFTAAVLLPSDRGLLCVTADQQFIFYSPVKTLEGEISLTTSKRLIGYNEEIVDMKFL
GDDEQFLAVATNVEHIRVYDVASMSCSFILAGHTDIVLCLDSCVSSSGTTLIVTGSKDNN
VRLWEAESKTCIGVGVGHMGAVGAVAFSKKRRDFFVSGSSDRTLKVWSFDGLSEDANKPI
NLKAKAIVAAHDKDINSIAVAPNDSLVCSGSQDRTACVWRLPDLVSVVVLRGHKRGIWSV
EFSPVDQCVVTASGDKTIKIWAISDGSCLKTFEGHMSSVLRASFLTRGTQLVSCGADGSV
MLWTVKTEERIAVYDQHEDKIWALAVGKKTEMLATGGSDAAVNLWYDSTALDKEEAFRKE
EEGVLKGQELENAVSDADYAKAIQIAFDLRRPHRLFELFSELCSKNDYDNHVGKTLGALG
KEDFRLLFEYLREWNTKPKLCHVAQFVLFRAFSILPPTEITEIKGIGELLEGLIPYSQRH
FSRIDRLVRSSFLLDYTLTGMSVIQPETDTKISNDEPLVDTDMKTRAADVVLPNEHTDEQ
NETHDEQEDKALSKKRKSKKSKSSAKKKAKGVGYTEVAAVPLAV
NT seq 2655 nt   +upstreamnt  +downstreamnt
atggcgactcctcccttcaagaagaactaccgttgtgttccattccttcaacagttctac
gaaggcggggcttttgtagtatcatcagacgcttctttcatcgcctgtgcttgtggcgac
tcgataaagatcgtcgatgcagacactgcggccattcggtcgactgtggaaggtggcgag
tctgaggtgttcactgctctggcattaagtccgaatgataaattgctgttctctgcgggc
cacagcaggcagattcgagtatgggacctctcgactatgaagtgtgttcggtcttggaag
gggcatgatggtcctgtgatgggtatgacatgccatttatctggtggattgttagctaca
gcaggagctgataggaaagtccttgtttgggatgtcgatggtggcttctgtactcattac
ttcactggtcacaaaggggtcgtttctagcattctatttcatcctgatcctaacaaacaa
ttgcttttctctggaagtgaggatgggagtgttcgagtttgggatcttatgtctaagaag
tgcattgctacacttggtcacgagtcaactgtgacatcatttgctatatctgaagatggt
tggaccttactaagtgctggaagagataaggttgtgaatgtgtggaacctgcgaaattat
acctgcaagaagactgtcctaacttatgaagtccttgaagctgttcttgttattaaatct
ggatcagattttgcttcatgtgttggttctttaagtcaaaaaagaaaggaaactagcgtg
tcctctgaaatctactttattacagttggagaacgtggggttgtacgtctatggagttct
gagagtgcagtttgcttgtttgagcaaaagtcctcagatgtttctaccaagatggatgaa
cagaacaggggcttcactgctgccgtcttgttgccttcagatcgaggattgctttgtgtg
acagctgatcagcagtttattttttattctccagtgaaaaccttggaaggcgaaataagt
ttgactacaagcaaaaggctgataggttataatgaagagatcgtggacatgaagtttttg
ggtgatgatgaacaatttcttgcagttgctaccaatgttgaacatatcagagtttatgat
gttgcttccatgtcatgctcattcatattggctggtcatacggatatagttctttgtctt
gactcctgtgtatcaagctcgggaactacacttattgtcactggaagtaaagacaacaat
gttaggttgtgggaagcagaaagcaaaacatgcattggtgttggtgtaggtcacatggga
gcagttggagctgttgcattttcaaagaagagacgggacttctttgttagtggcagtagt
gatcgtactcttaaggtgtggagttttgatggtctttcagaggatgcaaacaaacctatt
aatttgaaagctaaagccattgtagctgcccatgacaaggatatcaattccatcgcagtt
gcaccaaatgacagtttagtttgcagtggttctcaggaccgaacggcttgtgtttggagg
cttcctgatctggtatctgtagttgtgcttagaggacataaaagggggatttggtctgta
gagttttctccagttgatcaatgtgtggtcactgcttcgggtgataaaacgattaagata
tgggcaatatcagatggttcctgcttgaaaacttttgaaggtcatatgtcaagtgtgttg
agggcttcttttcttactcgtggcacccaacttgtatcttgcggtgctgatggatcagtt
atgctatggacagtaaaaacagaagagcggattgccgtctatgatcagcatgaagacaag
atatgggcattagctgtgggaaaaaagacagaaatgcttgctacaggtggtagcgatgct
gctgtcaatctctggtatgattcaacagcacttgataaagaggaagcttttcgaaaagag
gaagaaggtgttttgaaaggccaggaactggaaaatgctgtttctgatgctgattatgcc
aaagcgattcaaattgccttcgatcttcgtaggccacataggctctttgaactgttttct
gaactttgcagcaagaacgactatgataatcatgttggaaagaccctcggtgctcttgga
aaggaagactttcgtctattgtttgaatatcttagagaatggaatacgaagcctaaactt
tgccatgttgcacaatttgtgcttttcagagctttcagcatccttcccccaacagagatc
actgagatcaaaggtattggggaactccttgaaggtttaatcccatactcccagaggcat
ttcagcaggatagacaggcttgtaagaagctcatttttgttggactacacactgactgga
atgtcagtgattcaaccagagactgataccaaaatttctaacgacgagcccctggttgac
accgatatgaagactagagcagcagatgtggtacttccgaacgaacataccgatgagcag
aacgagactcatgacgagcaagaagataaggctctctccaagaaacggaaatctaaaaaa
tcgaaaagtagcgcaaaaaagaaagctaagggtgtgggctacactgaagttgcagcagta
ccgttggcagtgtaa

DBGET integrated database retrieval system