Cucurbita pepo subsp. pepo (vegetable marrow): 111777590
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Entry
111777590 CDS
T05351
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111777590
Spliceosome [BR:
cpep03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
111777590
Other components
Complex C specific factors
111777590
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Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
111777590
NCBI-ProteinID:
XP_023513020
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Position
LG16:complement(3724841..3734532)
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AA seq
871 aa
AA seq
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MDDYQEMERFGMENDYDDGQWIGGEFYYRKRKEKRSQTKDDVLYGVFATGSDSDSDGDGF
SSRKRRKDRDLSRKPDLTKPVNFVSTGTVMPNQEIDKISKDGDAENVEDNRPGLGLGSST
SGSGLGFSSSTADRNLDGFKENGSTVDGDEGGDDFFLPTAFGRKIKEGAERRERERVKSQ
IEKKSQVVAGGRKDSDSGNVGAFEKHTKGIGLKLLEKMGYKGGGLGKNKQGIVAPIEAKM
RPKHMGMGFNDFKEAPKVQALQELEEKTLPQPTTKAKERLWSKQVRSKKKKEAYLTAEEL
LASKQDQALEVVQKVFDMRGPQVRVLTNLENLNAEEKARENDIPMPELQHNVRLIVDLAE
LDIQKIDRDLRNEKETALSLQEEKEKLEIELARQKKQMDSMEEIMSMIERIGEDNSAGTL
TLDGLAKCFSGLQRKFGDEYKLCNLSCIACSFALPLFIRVFQGWDPLQNPSHGLEVILLW
KTLLQDEDCVDIWDVTSPYTLLVSEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPP
SVLHTVLDNVVMPKLASAVDLWEPQRDPVPIHMWVHPWLPLLGHKLEGMYQVIRTKLSFV
LGAWHPSDASAYTILSPWKAVFDSASWEQLMCRFIVPKLQLVLQEFQVNPGNQKLDHFYW
VTSWASAIPIHIMVDMMEKFFFSKWLQVLYHWLCSNPNFEEVTKWYMGWKELFPKELLAN
ESIRYQLSCGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAQAKQQGSAG
LGNASHLDSMGGTVEMTLKEVLEAHAQQYGLLFKLKPGRMHNGHQIYGFGNVSIIVDALN
QKVYAQTEESWSLVSLERLLDMHTSSTAKRR
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaagaaatggagaggtttggtatggagaatgattacgatgatggccaa
tggattgggggcgagttttattaccgaaagcgcaaagagaagaggtcccaaacgaaagat
gatgttctttatggtgtgtttgcgactgggtcggattcggactctgatggtgatggattt
tcgtctcggaagcgccgcaaggaccgcgacttgtctaggaaacctgacctcaccaagcct
gtcaattttgtatccaccggcaccgtcatgcccaaccaggagattgataagatttccaag
gatggagatgctgagaatgtggaagacaaccggcctggccttggcttgggctctagcacg
tctggttctggcctgggttttagttcttcgactgctgacaggaatcttgatgggtttaag
gagaatggttctactgttgatggagatgaaggtggtgatgacttctttttgcccactgcg
tttgggagaaagataaaggaaggagctgaaaggagggagagggaaagagtgaaatcacag
atagagaagaaaagtcaagtggtagccgggggaagaaaagattctgactctgggaatgtt
ggagcctttgagaagcataccaagggcatcggtctgaagctactcgaaaaaatgggatac
aagggaggtgggcttggaaaaaacaaacaagggattgtagctcctatcgaagctaaaatg
aggcctaagcatatgggtatggggtttaatgacttcaaagaggcacctaaggtacaagct
ttgcaggaacttgaggagaaaacattgccccaaccaacgacaaaggcaaaggagaggcta
tggtcgaagcaagtaaggtctaaaaagaagaaagaagcatatttaacagctgaggaatta
ctggctagcaagcaggaccaggcattggaggttgttcaaaaggtgtttgacatgcgtggt
cctcaggtgcgggtgttaacaaatttagagaacttgaacgctgaagagaaagccagagaa
aatgacatccctatgccagagcttcagcataatgtgaggttgattgtagatttggctgag
ttggatatccaaaaaattgatagagatttgagaaatgagaaggaaactgcactgagctta
caggaagagaaggaaaagttagagattgagctggctcgtcagaagaagcagatggatagt
atggaagaaattatgagcatgatagaacgaataggagaagataattctgctggaacattg
acattagatggacttgctaagtgtttcagtggcttgcagagaaaatttggtgacgagtac
aagttatgtaacttgtcttgcattgcatgttcatttgcactacctttgtttattagagta
tttcagggctgggatcctcttcaaaatccttctcatgggttagaagtgatattgttgtgg
aagactcttcttcaagatgaagactgtgttgacatctgggatgtgacatcgccttatact
ctcctggtttcagaagttgtgctacctgccgtacgaatctctggcataaatacttggcag
gctagggatcctgaaccaatgcttcggttcttagagtcttgggaaaaattgctgcctcct
tcagtccttcataccgtattggacaatgttgtcatgcctaaacttgcaagtgcagtagat
ttgtgggaacctcagcgagatcctgttcctatccacatgtgggtacatccatggctgcca
ttgttagggcataagctggagggtatgtatcaggtcatacgtacaaagttgagttttgtt
cttggtgcttggcacccgagtgatgcttctgcctatactatattatcaccttggaaagct
gtatttgattctgctagttgggagcagcttatgtgtcgatttattgtacctaaattgcag
cttgtcttgcaagaattccaagtaaatccaggaaatcagaaacttgatcatttttactgg
gttactagttgggcttctgccatacctatccacatcatggttgatatgatggagaaattc
ttcttctccaagtggctacaggtattgtatcactggttatgttcaaatccaaattttgag
gaggttacaaagtggtatatgggctggaaagaactcttcccaaaggagcttctggctaat
gaaagtatcaggtaccagcttagttgtggcctggatatgatgaatcaagccgttgaaggg
atggaggtagttcagccaggtttgaaagagaatatttcttaccttcgggttcttgagcaa
cgacagttcgaagctcagcagaaagctgctgcgcaagctaaacaacaaggctcagctgga
ttgggtaatgcttctcatttggacagtatgggtggtacagttgagatgactctgaaagaa
gtacttgaggcccatgcccaacagtacggtttgctctttaagcttaaacctggaagaatg
cacaatgggcaccagatatatggctttggaaatgtaagcataatagtcgacgctctaaat
caaaaagtgtacgcccaaactgaggaatcatggtccctagtatcccttgaacgattactg
gacatgcacactagttctacagcaaagagacggtag
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