Cucurbita pepo subsp. pepo (vegetable marrow): 111777766
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Entry
111777766 CDS
T05351
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 13-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111777766
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpep02000
]
111777766
04147 Exosome [BR:
cpep04147
]
111777766
04090 CD molecules [BR:
cpep04090
]
111777766
Enzymes [BR:
cpep01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111777766
Transporters [BR:
cpep02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111777766
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111777766
CD molecules [BR:
cpep04090
]
Proteins
111777766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
AAA_22
AAA_16
AAA_29
RsgA_GTPase
AAA_25
Zeta_toxin
AAA_15
nSTAND1
Motif
Other DBs
NCBI-GeneID:
111777766
NCBI-ProteinID:
XP_023513249
LinkDB
All DBs
Position
LG16:3599763..3606413
Genome browser
AA seq
1468 aa
AA seq
DB search
MTHEEKRQEDTSIDDALPFHKLLGYADALDWVLMALGTLGSVVHGMAQPIGYLLLGKALD
AFGNNIDDLDAMVDALYEVYLPIVFILLFCIEKYYVRIYFVFMFWQVIPFVWYMAIATFP
AGILGKIPFFLEQYLNQLLHIWKVYLHFILSIEIGCWMYASERQTARLRLAFLQSVLSQE
IGAFDTDLTTAEIITGISSHMNIIQDAIGEKVLGHFLSSVATFMSGFVIAIISCWEVSLL
TLLVAPLVLAIGATYTKRMTVISSFKMGYQSQATSLVQQSISQIRAVYAFVGERGCMKAF
AEQCEKLVVMSKQEALVKGVGIGMFQTVTFCCWSLIVWIGAVVITAGRASGGDIIGALGH
FLSSVATFMSGFVIAIISCWEVSLLTLLVAPLVLAIGATYTKRMTVISSFKMGYQSQATS
LVQQSISQIRAVYAFVGERGCMKAFAEQCEKLVVMSKQEALVKGVGIGMFQTVTFCCWSL
IVWIGAVVITAGRASGGDIIGAVLSILFGAITKYVKYNVQLHQMKYLSFLLCCSSLTYAA
PDMQIFNQAKAAGKEVFQVIQRKPPAIDGSEDKTLEHIEGNIDIREVHFAYPSRPQKLVL
QAFSLSIPAGQTIALVGRSGCGKSTVISLVTRFYDPLQGDIFIDHQNIKDLNLKFLRNNI
GIVSQEPVLFAGTIKDNIKMGKLDANDQQIENAARMANAHSFISNLPKQYSTEVGQGGTQ
LSGGQKQRIAIARAILKNPRILLLDEATSALDSESERLVQDALEKAIVERTVILVAHRMS
TIIGADMIAIIENGRVSETGTHQSLLETSKFYSNLFSMHNIKPIQDSRFVLRTKYNSNSL
SEPGSTHQQASSCDLDQDEKPEPKNFERDSLSQEGKERPKEIFFRIWFGLSNIEIMKTIF
GSFAAALSGISKPIFGFFIITIGVAYYHKNAKHKVGLYSLIFSLVGLLSLFTHTLQHYFF
GVVGEKAMKNFREALYSVISAVLRNEVAWFDRPENNVGSLTSQIMNTTSMIKTIIADRMS
VIVQCISSILIATTVSLIVNWRMALVAWAVMPFHFIGGLIQAKSAKGFAGDSAAAHYELV
SLASESATNIRTIVSFCHEEQIMKRARMTLEEPKRKSKRESIKYGVIHGISLCLWNIAHA
IALWYTAILVHKRQASFEDGIRSYQIFSLTVPSITELWTLIPTVISAIDILTPAFHTLDR
KTLIEPEIPKSPETEKIEGRIDFQGVKFNYPSRPEIVVLTNFSLQIKAGSKVALIGPSGA
GKSSVLALLLRFYDPEEGKILIDGKDIKEYNLRILRTHIGFVQQEPVLFSSSIRYNICYG
SEQVAETELLKVSREARVHEFVSTLPDGYDTLVGEKGCQLSGGQKQRIAIARTLLKKPAI
LLLDEPTSALDAESERTLVSALGSINGNNGLRTTQITVAHQLSTVTNSDVIVVMDRGEIA
EIGSHTSLLTAPDGVYSKLFRIQSLADD
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgaagagaaaaggcaagaagatacctccattgatgatgctttgccattccac
aagcttcttggctatgctgatgctttggattgggtcttaatggctttggggacattgggt
tctgttgtccatggcatggctcagccaattgggtatctgttgcttggcaaagcacttgat
gcatttggaaataatatcgatgaccttgatgcaatggttgatgccctctatgaggtatac
ttaccaattgtgttcatattgttattttgtatagaaaagtactatgtgaggatttatttt
gttttcatgttttggcaggtgattccatttgtatggtacatggccatcgccactttccct
gcaggaatactaggtaaaatccctttcttccttgaacaatatttgaatcaattacttcac
atatggaaagtatacttacattttattctctctatagaaattgggtgttggatgtatgca
agtgagagacagacggctcgcctaagattggcattcttgcaatcagtgcttagtcaggaa
attggtgcttttgacacagatctcacgactgccgaaataatcactggaatcagtagtcat
atgaacattatacaagacgccattggagaaaaggtattggggcattttctatcaagtgtg
gcgactttcatgagtgggtttgtgattgctatcataagctgttgggaagtgtcattgctc
acactcttggttgctccattggttcttgcaattggggctacttataccaagagaatgact
gtcatttcctctttcaaaatgggttaccaatcacaagctacttccttggtccaacagtca
atatctcaaatcagagcagtgtacgcatttgtgggggagagaggttgcatgaaggcgttt
gcagagcaatgcgagaaactggttgtgatgagcaagcaagaagcattggtgaagggagta
ggcataggaatgtttcaaactgtcactttttgctgttggagtctcattgtatggattgga
gccgttgtcattactgcgggaagggccagtggaggggacatcataggtgctttggggcat
tttctatcaagtgtggcgactttcatgagtgggtttgtgattgctatcataagctgttgg
gaagtgtcattgctcacactcttggttgctccattggttcttgcaattggggctacttat
accaagagaatgactgtcatttcctctttcaaaatgggttaccaatcacaagctacttcc
ttggtccaacagtcaatatctcaaatcagagcagtgtacgcatttgtgggggagagaggt
tgcatgaaggcgtttgcagagcaatgcgagaaactggttgtgatgagcaagcaagaagca
ttggtgaagggagtaggcataggaatgtttcaaactgtcactttttgctgttggagtctc
attgtatggattggagccgttgtcattactgcgggaagggccagtggaggggacatcata
ggtgctgttctaagcattctctttggagcaataaccaaatatgtgaaatataatgttcaa
ctacatcaaatgaaatacctctcttttttgctgtgttgcagctcactgacttacgctgca
ccagacatgcaaatattcaaccaggcaaaggcagcagggaaggaagttttccaagtcatt
caaaggaagccccctgcaattgacggttcagaagacaagacattggagcatattgaagga
aatatcgacatacgagaagttcactttgcttacccgtctcgacctcagaaactagtcctt
caagccttctctttgtccattccagcagggcagaccatagccttagtcggtcgcagcggg
tgtggaaagagtacagtaatctccctcgtcactagattctatgaccctctccagggagac
attttcatagatcatcagaacatcaaggatctgaatctgaaattcctcaggaataacata
ggaatagtttcccaggaacctgtactttttgctggaaccataaaggataatatcaaaatg
ggaaaactagatgcaaatgatcaacagatagaaaatgcagcaagaatggcgaatgcacac
tcttttatatcaaaccttccaaagcaatactcaacagaggttggacaagggggaactcaa
ctgtcaggaggtcaaaagcaaagaatagctattgcaagagccattctcaagaacccacga
attctcttactggacgaggccacgagtgcattagattcagaatctgagaggttggttcag
gatgccctcgaaaaggctatagttgagaggacagtcattttggttgcccacagaatgtcg
actattattggtgcagatatgattgcaatcatagaaaatggaagagtctcagagacagga
acacaccaaagtttgctagaaacaagtaaattctatagtaacctattcagcatgcataat
atcaaaccaattcaagactcaaggtttgttcttcgtactaaatacaattcaaattcattg
tcagaaccagggagtacccatcaacaagcttcatcttgtgaccttgatcaagatgaaaaa
ccggagccaaaaaatttcgaaagagattctttgagccaagaagggaaagagagaccaaaa
gaaatattctttagaatctggtttggcctgagtaatatagagattatgaagactattttt
ggatcttttgcagcagctttgtctggcatctcaaagcctatctttggattctttatcata
acaataggggtagcctactatcacaaaaatgcgaagcacaaagttggattatactccctc
atcttctctctggtgggattactatcactttttacgcacaccttgcaacactatttcttc
ggagtagtgggagagaaggcaatgaaaaacttcagagaagctctctattcagttatttca
gctgtactacgcaatgaagtagcatggtttgacagacctgaaaacaacgttggttcactt
acatcacaaataatgaacactacctccatgataaagaccataatagctgatcgaatgtct
gttattgtgcaatgcatctcctccattttaattgccaccactgtcagcttgatcgtcaac
tggagaatggctctcgttgcttgggctgtcatgcctttccattttattggtggcctgata
caagccaagtctgccaagggatttgcaggagattctgctgctgctcattatgaactagtt
tcgctagcatccgagtcagcaaccaacataagaactattgtatctttctgccatgaagaa
caaatcatgaaaagagcaagaatgacattagaagaaccaaagagaaaaagcaagagagaa
agcatcaaatatggagtcattcatggcatctccctttgcttatggaacattgcccatgcc
attgctttgtggtacacggcaattttggttcacaaaagacaagcatcctttgaagatggc
ataagatcataccagattttctccctcacagtgccctcaatcactgaattgtggacatta
attccaactgtcatctcagccattgacatactaactccggcattccacacgcttgatcga
aaaactcttattgaaccagaaataccaaaaagtccagaaacagagaaaattgaagggaga
attgattttcaaggtgtaaaatttaactatccatcaaggccagaaattgttgttcttaca
aacttcagcttacaaatcaaagcaggatcaaaggtggctcttattggaccaagtggtgct
ggaaagtcctccgttttggcacttctgctcagattctatgaccctgaagaaggcaagatc
ctcattgatgggaaggatataaaagaatacaatctgagaatattgaggacacatataggg
tttgtgcaacaagagcctgttctatttagctcctcaatcagatataatatttgctacggg
agtgagcaggtcgcggaaactgaacttttaaaggtgtcaagagaagctagagtacatgaa
tttgtcagtactttacctgatggttatgatacacttgttggagaaaaaggttgccaacta
tcaggaggacaaaagcagagaatagctattgctagaacccttttgaagaagccagcaatt
ttgctcctagatgaaccaacgagtgcattagatgctgaatctgaaagaactctagttagt
gctttagggtcaataaacgggaacaatggactcagaactactcagattacagttgcccat
cagctctccacagtgacaaactcagacgttattgtagtcatggatagaggtgagattgcg
gagataggttcacatacctccctgttgacagctcctgatggagtgtattcaaaactcttc
agaatacagagtctcgctgatgattaa
DBGET
integrated database retrieval system
