KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111777820
Entry
111777820         CDS       T05351                                 
Name
(RefSeq) THO complex subunit 7A
  KO
K13176  THO complex subunit 7
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111777820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111777820
   03041 Spliceosome [BR:cpep03041]
    111777820
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     111777820
Spliceosome [BR:cpep03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111777820
SSDB
Motif
Pfam: THOC7 APG6_N DUF1818 SPATA1_C
Other DBs
NCBI-GeneID: 111777820
NCBI-ProteinID: XP_023513308
LinkDB
Position
LG16:4032665..4036457
AA seq 241 aa
MSVRGRKVSTRGEAVAASYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE
IEKDGSNHDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINRQILLA
QDDIEDLKKQLEESKIERQHKEECEAIRKLVAAQPPRSVTQKTILELEKEIAALDAENTA
SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLMEEMRITAEENKIGVDDASGGLEAMAV
D
NT seq 726 nt   +upstreamnt  +downstreamnt
atgtcggtgagagggaggaaagtctccacccgaggggaagcagtggcagcaagttatgct
tttgggccactcgaagatgatgttattataaaacacaggcttctcacccgtacaacgacc
acaaggggggaacctccattgaagaagctccagaagaagttcacttcctttgttcttgag
attgaaaaggatgggagtaatcatgatgattgtgagaagctttccagagctttcttacaa
gagctatccacgtttgaaattcctttgctgaagagtaaagcagttgtggatgcaaatatt
agggaaaaggagagtttccatgagtttaaggatgagataaacagacaaattttgttagct
caggatgatattgaagatcttaagaagcagcttgaagaaagcaaaattgagaggcaacac
aaggaggagtgtgaggcaattaggaaacttgtagcagcacagccacccaggtctgtgaca
caaaagactattctggagttagagaaagagattgcggcacttgatgcggagaacacagct
agttcaaggatgctggagcttcgcaagaaacaatttgcacttctgttgcatgtggtggat
gagttgcaaaacaccatagaggatgaacagaagagtttaatggaagaaatgagaatcaca
gctgaggagaacaagattggtgtggacgatgctagtggaggcctggaagccatggctgtg
gactga

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