Cucurbita pepo subsp. pepo (vegetable marrow): 111778046
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Entry
111778046 CDS
T05351
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111778046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111778046
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111778046
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111778046
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
111778046
NCBI-ProteinID:
XP_023513424
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All DBs
Position
LG17:7696748..7700895
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AA seq
305 aa
AA seq
DB search
MELDGLERAPPSMDVMNEEDKTLQCHCQFPSISKPRISNNDNPTTTSVHELLECPVCTNS
MYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCS
EILPYYSKLKHESACYFRPYTCPYAGSDCPVDGEIPFLVSHLRDDHKVDMHSGCTFNHRY
VKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVFLRFMGDETDARNYSYSL
EVGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFSGGERKELKLRIMGRIWK
EQNKQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggagttggatggcctcgaacgcgcgccgccgtccatggacgtgatgaacgaggaggac
aagacccttcaatgtcactgtcagtttccgtcgatttccaagcctcggatcagcaataac
gacaatccgaccactacaagtgtccacgagctgctggaatgtcctgtctgcactaattct
atgtatcctccaattcatcagtgtcccaatggacataccctctgctcttcgtgtaaaacg
aaggtagacaaccgttgcccgacgtgcagacaagagctcggtgatattagatgtctagca
ttagaaaagatagccgaatcgcttaaactggcttgtaaattctgcacgttcgggtgctcg
gagatattgccgtactatagtaaactaaaacatgaatctgcctgttacttcagaccatat
acctgcccttatgctggatcagactgtccagttgatggggagattcctttccttgtttct
catcttcgagacgatcacaaagtcgatatgcattccggatgcacgtttaatcatcgttac
gtaaaggctaatccatgtgaagttgaaaacgctatatggatgttaactgtcttccactgt
tttgaccagtatttctgtcttcattttgaagcctttcagcttggtatggcaccagtttac
atggtgtttctccgattcatgggcgacgaaacagacgcccgaaactacagttacagcctc
gaggtcggtgggaatgggaggaagctaacgtgggaaggcaaccctcgaagcattcgggac
aaccacaagaaagtccgagacagccacgatggcctcattatacatcgaaacatggcactg
ttcttctcgggcggggaaaggaaagagctgaagttgcggatcatgggacggatttggaaa
gaacaaaataaacagtga
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