Cucurbita pepo subsp. pepo (vegetable marrow): 111778186
Help
Entry
111778186 CDS
T05351
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111778186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111778186
03110 Chaperones and folding catalysts [BR:
cpep03110
]
111778186
03029 Mitochondrial biogenesis [BR:
cpep03029
]
111778186
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111778186
Enzymes [BR:
cpep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
111778186
Messenger RNA biogenesis [BR:
cpep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
111778186
Chaperones and folding catalysts [BR:
cpep03110
]
Heat shock proteins
HSP60 / Chaperonin
111778186
Mitochondrial biogenesis [BR:
cpep03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
111778186
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111778186
Exosomal proteins of other body fluids (saliva and urine)
111778186
Exosomal proteins of breast cancer cells
111778186
Exosomal proteins of colorectal cancer cells
111778186
Exosomal proteins of bladder cancer cells
111778186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
111778186
NCBI-ProteinID:
XP_023513641
LinkDB
All DBs
Position
LG17:7438102..7442042
Genome browser
AA seq
573 aa
AA seq
DB search
MHRFACGLASKARLARNSSHQINSRLNCSRNYAAKDIKFGVEARALMLRGVEELADAVKV
TMGPKGRNVVLEQSYGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGVNAMDLRRGITMAVDSVITILKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITISDGNTLDNELEIVEGMKLDRGFISPYFITNQK
NQKCELEDPLILIHEKKISNLNAVVKVLELALKRQRPLLIVAEDVESDALATLILNKLRA
GIKVCAIKAPGFGDNRKASMQDLAILTGGQVITEELGLDLEKVGAESLGSCKKVTVSKDD
TVVLDGAGDKKAIEEQSDQLRSLIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GERKDRVTDALNATKAAVEEGIVAGGGVALLYASKELEKLHTANFDQKIGVQIVQNALKM
PIYTIASNAGVEGAVVAGKLLEQDNSDLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAA
SVSSLLTTTEAVVVEQANDDKEAAPSMGGAMGY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcttcgcctgtggcctcgcctctaaagccaggttggctaggaacagttcccat
cagatcaattctagattgaactgcagtaggaattatgcagcgaaggacattaaatttggg
gttgaagcgcgcgccttgatgcttaggggtgttgaagagcttgcagatgctgtcaaagtt
acaatgggaccgaaagggcgtaatgtagtgttagagcagagttatggtgccccaaaagtg
acgaaagatggtgttactgttgcaaagagcattgaattcaaagataaagtaaaaaatatt
ggtgcaagtttggtgaagcaggttgcaaatgctaccaatgatgtggcaggagatggtaca
acatgtgcaacggttcttactcgtgcaatatttactgaaggatgtaaatctgtggctgct
ggagtgaacgctatggacttgagacgtgggattacgatggcagttgattctgttattaca
attctgaagagcagagcccggatgatcagtacatctgaagaaatcgcccaggttggaaca
atatcagctaatggagaacgagagatcggtgagctaatagctaaggctatggaaaaagta
ggaaaggagggagttatcaccatttcagacggtaacacactcgataatgaattggagatc
gttgagggaatgaagctggacaggggtttcatatctccttattttattaccaaccagaaa
aaccaaaaatgtgaattggaagatccactaattttaatacacgaaaagaaaatctcaaat
ttaaatgctgtggtaaaagtcttggagttagctctgaagaggcaaagacctttacttatt
gttgctgaagatgtggaaagtgatgcattagctacccttattttaaacaagttacgtgct
ggtattaaggtttgcgcaattaaagctcccgggttcggtgataataggaaggctagtatg
caggatctggcaattctcacaggaggccaggtcataactgaggaacttggtctagatctt
gaaaaagttggtgctgaatcattgggttcatgcaaaaaggttacggtgtcgaaggatgat
actgtagttcttgatggggctggtgacaagaaggcgattgaagaacagtctgaccagttg
cgatccttgattgagttgagcacttcagactatgacaaagaaaagctgcaagaacggctt
gcaaagctttctggtggagttgctgtcctaaagattggtggggctagtgaagccgaagtt
ggggaacgaaaggatagagttaccgatgcgctaaatgctacgaaagcggccgtggaggag
ggaattgtggctggcggtggtgtcgctctgctctatgcatcaaaggagttggagaagttg
catactgcaaattttgatcagaagatcggtgttcaaatcgttcaaaacgctctaaagatg
cctatttacacaattgcttctaatgccggagttgaaggagcagttgtggctgggaagcta
ctcgaacaggacaattccgaccttggatacgacgcagctaaaggcgaatatgtagacatg
atcaaggctggaattattgatcccttgaaagttatcagaaccgcgctagtagacgccgca
agcgtatcttcactactgacgacgaccgaggccgtggtggtcgaacaagctaacgatgat
aaggaagctgccccatcaatgggaggcgccatgggttactga
DBGET
integrated database retrieval system
