Cucurbita pepo subsp. pepo (vegetable marrow): 111778367
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Entry
111778367 CDS
T05351
Name
(RefSeq) CLIP-associated protein-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111778367
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpep04812
]
111778367
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
111778367
Cytoskeleton proteins [BR:
cpep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
111778367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
Vac14_Fab1_bd
HEAT_2
TOR1L1_N
Adaptin_N
Cnd1
MMS19_C
HEAT_Maestro
INTS1_R4
Tti2
UTP20
Sec7-like_HUS
TPR_TTI1_N
MMS19_N
Dopey_N
V-ATPase_H_N
HEAT_DAAF5
ARM_ECM29_C
SEN1_N
Motif
Other DBs
NCBI-GeneID:
111778367
NCBI-ProteinID:
XP_023513915
LinkDB
All DBs
Position
LG17:7424761..7436964
Genome browser
AA seq
1441 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLYELLEASRKSLNSAETTALVDCCLDLLKDNNFRVSQG
ALQALASAAVLSGEPLKLHFNALVPAVVERLGDAKQPVREAARRLLLTLMEISSPTIIVE
RAGSYAWSHKSWRIREEFARTVTAAIGLFASTELTLQRAVLPSILQMLNDPNPGVREAAI
VCIEEMYTQAGPQLRDELQRHHLPTYMVKDINARLEKITPQVRSSEGLGSFSVGDLKPAN
INPKKSSPKAKSSNREVSLFGGESDVTEKQIDPIKVYSEKELIREIEKIASILVPEKDWS
IRIAAMQRIEGFVSGGAADYPCFKGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKEL
LGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADSAKNDRNA
VLRARCCEYALLILEYWADAPEIQRSADLYEDLIRCCVADAMSEVRATARLLYRMFAKTW
PERSRRLFSSFDLVIQRLINEDDGGIHRRHASPSVRDRGTMMPLNSQPSTGSSLPGYGTS
AIVAMDRSSSLSSGASLSSGLLSQSKTSVDGSERSLESVLHSSKQKVNAIESMLRGLDLS
EKHNANLRSSSLDLGVDPPSSRDPPFPQALLATNHLSNSSTAELTASNQNKVRSRQGGLG
LSDIITQIQASKGSGKSSYRSNVVSESLPTFSSYSVKRVVDRHQERGSVEENNDIREAKR
YITPQIEKHYLDTSYRDGNYKDSHNSYIPNFQRPLLRKNAAGRMSATRRRSFDDSQLPLG
EMSSYVDSPASLSDALSEGLNPSSDWCTRVGTFNYLQSLLQQGPKGIQEVLQNFEKVMKL
FFQHLDDPHHKVAQAALSTLADIIPTCRRPFESYMERILPHVFSRLIDPKELVRQPCSTT
LEIVSKSYSTDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHVVNSDGFSNNGILKLW
LAKLTPLVYDKNTKLKEAAITCIISVYSHFEPAAVLNYILSLSVEEQNSLRRALKQYTPR
IEVDLMNFLQNKKERQRPKSLYDPSDVVGSSSEEGYVSMSKKNQFFGRYSAGSLDDESGR
KWNTNQESTLVTRSIGQATSDELRENLYHNFDSGSSNDVINLKTKEANYLENSTHQNLGS
RTSLVDNVDNSVDFDDYSSLHLVNGEIDSNHLGVAENIGYDDEASLELGSHQHKIKSVNS
MMDTCPSIPQILHLISTGNGESPSASKCGALQQLVETSISNDPSIWTKYFNQILTVILEV
LDNSDSSVREVALTLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSNDAENCLTIV
LSQYDPFRCLSVIAPLLVTEDEKTLVTCINCLTKLVGRLSQEELMTQLPTFLPALFEAFG
HQSADVRKTVVFCLVDIYIMLGKQFLPHLEALNSTQLRLVTIYANRISQARTGTAINANH
D
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcattggagctggctcgtgccaaggacaccaaggagcgcatggccggcgtc
gaacgcctgtatgaacttctcgaagcttccagaaaaagtttgaattccgccgagactacg
gccttggttgattgctgcctcgatcttctcaaggacaacaactttagggtttcccagggt
gctctccaggctttggcttctgctgctgtgctctctggcgagcctctcaagttgcatttc
aatgcccttgtccccgctgttgtcgagcgattgggtgatgcgaagcaacctgtgagagaa
gccgcaaggaggctcttgctcactcttatggagatttcttctccaacaatcattgttgaa
agagctggctcttatgcatggtcacacaaaagctggagaatacgggaagagtttgcaaga
actgttacagcagccattggcttatttgcatcaactgagcttacacttcagcgggctgta
ctaccttcgattttgcagatgttaaatgatccaaaccctggagttagggaagcagctata
gtctgtattgaggagatgtatacacaggctgggccacagttgcgtgatgagcttcagcgc
catcaccttcctacctatatggtgaaagatattaatgctcgtcttgagaaaattacacct
caagttcggtcctcagaaggactaggtagtttttcagttggagacctgaagcctgcaaat
attaaccctaaaaaaagtagtccgaaggctaagagttccaacagggaggtttctcttttt
ggaggagaaagtgatgtaactgagaagcagatagatcctataaaagtgtattcggagaag
gagctaataagggaaattgagaagatagcttctatccttgttccagaaaaggattggtct
attcgcatagcagccatgcagagaatagagggctttgtttctggaggtgctgctgactat
ccatgttttaagggattgttgaaacagctggttggacctctcagtactcaattatctgat
agaaggtctagcatagtgaaacaggcttgccatttgttatgcttcttgtctaaggaactt
ttgggagattttgaagcctgcgctgaaatgtttattccagtccttttcaagctggttgtc
attactgtccttgtaattgcggagtctgctgataattgcataaaaacgatgttgcgtaac
tgtaaagttgcacgtgtgcttccccgtatagctgatagtgcaaaaaatgatcgaaatgct
gtactacgtgcacggtgttgtgaatatgcacttctcattctcgagtattgggctgatgca
cctgagatacagcgatctgctgatttatatgaggatctaatcaggtgttgtgtagctgat
gcaatgagtgaggttcgagccactgcacgattactatacaggatgtttgcaaaaacttgg
ccggagcgttccagacgtttattttcctcatttgaccttgtgattcagaggttaattaat
gaagacgatgggggtatacataggcgacatgcttctccatctgttcgtgatagaggtaca
atgatgccactcaactctcaaccatcgactggctcaagcttacctggatatggaacttct
gctattgttgcaatggatagaagttcaagtttatcgtctggggcttcgctctcatctgga
cttctgtctcagtctaagacttctgttgatggttctgaacgtagtttggaaagtgtgttg
cattcaagcaaacagaaggtcaatgcaattgaaagcatgctcagaggcttggatttatct
gagaaacataatgcaaatcttcgatcatctagtttggatctaggagttgaccctccatca
tctcgtgatccaccctttcctcaagctttactcgcaactaatcatttgagtaactcttct
acagctgaattaactgcatcaaatcagaataaagttaggagccggcaaggtggattgggt
ttatctgatatcatcactcaaattcaagcttccaaaggttctggtaaatcatcatatcgc
agcaatgtggtcagcgaatctttgcctactttttcatcttactctgtgaagcgggttgtt
gaccgacaccaggaaaggggttctgttgaagagaataatgatattagagaggctaagcgg
tatattaccccgcaaattgagaagcattacttggatacatcttatagggatgggaactac
aaggattctcataatagttatattcccaacttccagagaccactgttgagaaagaatgca
gctgggcgaatgtctgcaacgaggcgtcggagttttgatgatagccagctaccacttggg
gaaatgtcaagttacgttgacagcccagcttctctcagtgatgctcttagtgagggactt
aatccatcttctgactggtgcactagggttggcacctttaattatcttcaatctttgctg
cagcagggtccaaaaggaatacaagaagtactccaaaattttgagaaggtaatgaagttg
tttttccagcacttggacgacccacaccataaagttgcacaggcagcactttcaacactg
gctgatataattccaacctgccgaaggccatttgagagctatatggaaaggatcttaccc
catgttttctctcgattgattgacccaaaggagttagttaggcaaccctgctcaacaact
ttggaaattgttagtaaaagttatagtaccgattctctcttacctgctttactccgttct
ctggatgaacagcggtcaccaaaggcaaagctggctgttattgagtttgctataaattct
tttaacaagcatgttgtgaattctgatggctttagtaataatggcatcctaaagttatgg
cttgctaaactgacaccattggtttatgacaaaaatacaaagttgaaggaagcagccatt
acatgcattatatctgtttactcacactttgaaccagcagctgtcttgaattatatcctt
agcctatcagttgaagaacagaattccttgaggcgagcccttaaacaatatactcctcgc
attgaggtggacttgatgaactttttacagaacaagaaagaacgccaacgacctaagtcc
ttgtatgatccatctgatgtggttggatcatcttctgaggaagggtatgttagcatgtcc
aaaaagaatcaattctttggtagatattcagctggttctcttgatgacgagagtggtagg
aagtggaatacgaaccaggaatcaaccctggtaacaaggagcattggtcaagctacttct
gatgaacttcgtgagaacttgtatcataattttgattctggttccagcaatgatgttatt
aatttgaaaaccaaagaggcaaattatttggaaaattctacacatcaaaacctgggttca
cggactagtctggtggataatgttgataatagtgttgactttgacgattattcttccctg
catttggttaatggtgagattgacagcaatcacttaggagttgctgaaaacattgggtat
gatgacgaggcttcactagagctcggttctcatcaacacaaaattaaatctgttaactcc
atgatggacacatgccctagtatccctcaaattcttcacctgataagtactggcaatggt
gaaagcccttctgcaagcaaatgtggtgcactgcagcagctagttgaaacttccataagt
aatgatccgtccatttggaccaagtacttcaatcaaattttgacagtgatactggaagtg
ttggacaattctgattcctctgtacgcgaggttgctcttacattgataactgaaatgatt
aagaaccagagggattcaatggaagattctgttgagatcgtgattgagaaactcctccat
gttactaaggacattattcccaaagtttcaaatgatgcagagaattgcctgaccatcgtg
ttatctcagtatgatccattcagatgcttaagtgttattgctcccttgttggttactgag
gatgagaaaactcttgtgacctgcatcaattgcttgacaaagctcgtaggtcggctctcg
caagaggagttgatgacacagttgcccacttttttgcctgctctctttgaagcatttgga
catcagagtgctgatgtgaggaagactgttgtgttctgtcttgttgacatctacataatg
cttgggaaacaatttttgcctcacttggaggcactcaacagcactcagctacgtttggtt
acaatttacgccaatcgaatttcgcaagctaggacaggaaccgccatcaacgccaatcat
gattaa
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