Cucurbita pepo subsp. pepo (vegetable marrow): 111778416
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Entry
111778416 CDS
T05351
Name
(RefSeq) transcription factor TCP7-like
KO
K16221
transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111778416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111778416
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Other transcription factors
TCP
111778416
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GFIT
Motif
Pfam:
TCP
Motif
Other DBs
NCBI-GeneID:
111778416
NCBI-ProteinID:
XP_023513991
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Position
LG01:6847176..6848959
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AA seq
250 aa
AA seq
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MSNSDSGNTNGVSNGAAIDTPKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAA
RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFSSVSLSVRGNGGSTSLSS
PSSTTSTLSLSRPQALSGPTPFILGKRVRSDDDGGKDDGSGVGPTGPGGYWAVPARPDYG
QVWSFAAAAPSEMVVQPGGISQQASLFAQPQQPIREASAARVGNYLPSHLNLLASLSGGG
GSGRREDDPR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattccgattctggcaacaccaatggagtctccaatggcgccgccattgatacc
cccaaaaaccagccctcttcaaatggggccctcgtcgttaaaaagcctccctccaaggac
cgccatagcaaggtcgatggtcgtggtcgccgcatccgtatgcccatcatatgcgccgct
cgagtattccagttgactcgagagcttggtcataagtccgatggccagaccatcgagtgg
ctccttcgccaggctgagccctctattattgccgccactggtaccggcactaccccggct
aatttctcctccgtctctctttccgtcagaggaaatggcggctccacttctctctcttcc
ccttcttccaccacttcaactctctccctctctcgcccccaggctctctcgggccccacg
ccgtttattctcggcaagcgcgttaggtccgatgacgacggcggtaaggacgatgggtcg
ggagtgggtccgactgggccaggtgggtactgggcggttccagcgagacccgattatggg
caggtgtggagttttgccgccgcggctccctcagaaatggtggttcaacccggggggatt
tctcaacaagcgtcgttgtttgcccaaccgcagcagccgattagagaagcgtcggcggcg
agagtggggaattaccttcccagtcatctgaatttactggcgtctttgtccggtggcggt
ggttctggccggcgggaagatgaccctcgctga
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