Cucurbita pepo subsp. pepo (vegetable marrow): 111778496
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Entry
111778496 CDS
T05351
Name
(RefSeq) nuclear poly(A) polymerase 4-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111778496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111778496
Enzymes [BR:
cpep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
111778496
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
111778496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DNA_pol_B_palm
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
111778496
NCBI-ProteinID:
XP_023514136
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All DBs
Position
LG17:4380870..4386238
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AA seq
753 aa
AA seq
DB search
MGRAEYSPLTAKQAVPKCHGVTQPISLAGPCDADVQRNKELEKFLVDSGLYESKEESAKR
EEVLCRIGQIVKDWVKQLTRIKGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGP
CYVNREEDFFYILHNILEELEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISRLVVPE
DLDISDVSVLYNVDEQTVRSLNGCRVADQILKLVPNIENFRTALRCLKFWAKRRGVYSNV
TGFLGGVNLALLVARVCQLYPNAVPSMLLSRFFRVYTQWRWPNPVMLCAIEEDDLGCSVW
DPRKNHRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNRVCEEIELNKAQWSS
LFEPYLFFESYKNYLQVDIVAADADDLRTWKGWVESRLRQLTLKIERNTNGKLQCHPYPH
EYVDTSKPCAHCAFFMGLQRKQGEIIQEGQQFDIRSTVDDFKHNVNMYMFWKPGMEIFVS
HVHRRQIPLFVFPEGHRPRASRVSALQRSDGPNQEDVQNCRSGSGERYLKRKNDLNRIEG
EHGFPDKRRSISPRRQDSVSSNISQFSNSASSEHPEADVEAKTIDEKNSMCQTITRETEE
LTFGVSSIGSGSSRKESRSVESDKGCTKEKLESEKIPCIEIGHRCASNSSVITTLASESS
SCENVGFAAGSSEGNAGSIEGSANESNNPGTPVVDSCEADSELQLENSCVNGDIMHMEPK
PNAALEMALNPGGGVKTETIPNSVIRLSMASTA
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggggagagcagagtattcaccgttaactgctaaacaagcggtgccgaagtgccatggt
gtgacacagccaatatcgttggcagggccctgtgacgctgacgtgcaaagaaacaaggag
ttggaaaagtttctggttgattctggcttgtacgaaagcaaagaggaatctgccaagaga
gaggaggttctttgccggataggacagattgtgaaagactgggtaaaacagcttactcgc
ataaaaggttatacagatcaaatggtggaggatgcgaatgctgtgatctttacttttggt
tcctatcgtctcggggtgcatggacctggagctgatatagacacgttatgtgttggacca
tgctatgtgaaccgggaggaggatttcttttatatattacacaatattttggaagaactg
gaagaagtgactgagttgcagccagttcctgatgctcatgtcccagtgatgaaattcaag
tttgatggaatatctattgacctactttatgcaagtatatctcgtctggttgtgcctgaa
gatttggatatctctgacgtgtctgtcctgtataatgttgatgagcaaactgttagaagt
cttaatggttgtcgggttgctgatcaaattctaaagcttgttccaaatattgagaatttt
cgaacagcacttagatgcttgaagttttgggcaaaaaggcgtggtgtttattcaaatgtt
actggatttcttggtggggtaaacttggcacttcttgtggcacgggtttgtcagctttat
ccaaatgcagtaccaagtatgctgttgtctcgatttttcagagtctatacccagtggcgt
tggccaaaccctgtgatgttgtgtgcaattgaggaagatgatcttgggtgttctgtatgg
gatcctcgtaaaaatcatcgcgatagaactcatcatatgcctattataacacctgcatat
ccatgcatgaattctagctacaatgtttctacaagtacgctccgagttatgatggaacag
ttccagtttggtaacagagtttgtgaggaaattgagctgaataaagcacagtggagttct
ctttttgagccgtatttgttttttgaaagctacaaaaactatttgcaagttgatatagta
gcagctgatgctgatgacctacgcacttggaaaggatgggtagagtctcggcttaggcag
ttaacattgaagattgagaggaatactaacggaaagttacagtgtcatccttatccacat
gaatatgtcgacacatccaagccatgcgcccattgtgcgtttttcatgggcctgcagagg
aagcagggagaaataattcaagaagggcagcagtttgatatacgttcaacagttgatgac
ttcaagcataatgtaaatatgtacatgttttggaagccaggaatggaaatctttgtttct
catgtccatagaaggcagatccctctttttgtgtttccagaaggtcatagacctcgtgct
tcaagggtgtcagctttgcaacgttctgatggaccaaatcaagaagatgtacaaaattgt
aggagtggcagtggtgagagataccttaagagaaaaaatgatctcaatcgaattgaagga
gagcatggttttcctgacaaacgacggtctattagtcctagaaggcaggattcagtttca
tccaacatcagtcaattttcaaatagtgcttcttctgagcatccggaagctgatgttgaa
gctaaaactattgatgagaagaatagtatgtgtcagacgatcactcgggaaactgaagag
ttgacttttggtgtctctagtattggcagtggttcttcaaggaaagaatctagaagtgta
gagagtgacaaagggtgtacaaaagagaaacttgagtcagaaaaaattccttgtatcgaa
attggtcatagatgtgcatctaattccagtgtgatcactaccttagccagtgaaagtagt
tcctgcgagaatgttgggtttgctgcgggtagtagtgaaggaaatgctgggagcatagaa
ggaagtgctaatgaaagtaacaatccagggacacctgtggttgattcgtgtgaggcagat
tctgaacttcagttggagaacagttgtgtaaatggagatatcatgcatatggagccaaag
ccaaatgctgcacttgagatggcattaaatcctggaggtggggttaaaacagaaaccatc
ccgaactcagtgataagattgagtatggcctcaacagcgtaa
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