Cucurbita pepo subsp. pepo (vegetable marrow): 111778509
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Entry
111778509 CDS
T05351
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111778509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111778509
03036 Chromosome and associated proteins [BR:
cpep03036
]
111778509
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111778509
Coactivators
SAGA/TFTC/STAGA complex
111778509
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111778509
STAGA complex
111778509
TFTC complex
111778509
SAGA complex
111778509
SLIK complex
111778509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
111778509
NCBI-ProteinID:
XP_023514156
LinkDB
All DBs
Position
LG17:complement(3436288..3443462)
Genome browser
AA seq
675 aa
AA seq
DB search
MADSIPSPKPVQPNPMDPSPPPPQQQPQVQPSTAAIPQNSSNSTNSSANPPIPAASALAQ
SPSIDQLHPLSQISSPPLSHISQNPQNQQQQQQLSPAVGLEYQQKPLQLQQQQQQQQQQQ
QLQQHSQQMVQQPQNANAMTNFQIQQALQRSPSMSRLNQQQQQQQQQFGMMRQQSGLYSP
MSFGGSSTNQQQQLQQPNQQHQMGTGNLSRSALMGQGNHLPMLSGATAAAQYNLQSQLLA
SSKQKAGLVQGAQFQSSNSHGQPLQGMQTMGMMGSMNLSSQLRANGLASYAQQRINQGQI
RQQLSQQSSLTSPQVQNLPRMSNLGFMNQQLSNLAQNGQPTMMQNSLQQQQWLKQMPSMS
SPGSPSYRLQQRHQQVLLQQQLASSSQLHQNSMSLNPQQFPQLVQQQPSMGHQQLHQQQQ
QQQQPQQLQQQQQQLQQLQQLQQQPLHQQQQQQLLQQPSQLQSLQPALHQQQHSPRIAGL
AAQKSLSLTGSHPDATVSGTSTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPFGKLEPEV
EDLLLEIADDFIDSVTTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNRN
KNLSSSDTHKKRLDMIRILKEASRVETNVNSPKEMVRQGVGMPIGTNNLMRPSSSSEQLL
SQTTGSQLLQQMTRF
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagtattccgtcgcctaaaccggtccaaccgaaccctatggacccttcccca
ccgccgccgcagcaacaaccgcaggtccaaccttcaaccgctgctattccgcagaattca
tctaattcaacaaattcgtctgcaaatcctcccattcctgcggcttctgcgcttgctcag
tcgccctcgattgaccagttacatccactatcgcaaatttcttctccccctctttcgcat
atctctcaaaatccgcaaaatcaacagcagcagcaacagctaagccctgcggttgggttg
gagtaccaacagaagcctctacagctgcagcagcagcaacagcagcaacagcagcaacag
caactgcaacaacattcgcagcaaatggtgcaacagcctcagaatgcgaatgcgatgaca
aatttccaaatacagcaggctttacaacggtccccttcaatgtccaggttgaaccagcag
cagcagcagcagcagcagcagtttgggatgatgagacaacaatcggggctttatagtcca
atgagttttggtgggtcttctacaaaccagcaacagcagctacaacagcctaaccaacaa
caccaaatgggaaccgggaatctgtcgcggtctgcattaatgggtcagggtaaccatttg
cccatgttgtctggggcgactgctgctgctcagtataacttgcagtcacaactactggct
tcgtcgaagcaaaaagctgggttagtccagggtgcacaatttcagtcgagtaactctcat
gggcaacctttgcaaggaatgcaaacaatggggatgatgggatcaatgaatttgagctca
caactaagagctaatggccttgcgtcatatgcccaacagagaataaaccaaggtcaaata
aggcagcaattgtcccaacaaagttcacttacctctccacaggttcagaacttaccgaga
atgtcaaatcttggattcatgaatcaacaattgagtaatttggctcagaatgggcagcca
accatgatgcagaactctttgcaacagcaacagtggctgaagcaaatgccatcgatgtct
agccctggctcaccatcatatcgtcttcaacagaggcatcaacaggtcctgttgcagcag
caactggcttcatctagtcaattgcatcaaaactccatgtccttgaaccctcaacaattt
cctcagcttgtacagcaacagccgtccatgggacatcaacagcttcatcaacaacaacag
caacagcaacagccacagcagctgcaacaacaacaacagcaactgcaacagctacaacag
ctacaacaacagccacttcatcaacaacaacaacaacaactacttcaacaaccatcacaa
ctccaatctctgcaaccagcattgcatcagcagcagcattctcctaggatagctggactt
gcggctcagaaatctctcagtttgactgggtcacatccagatgccacagtatctggcact
agtacacctgggggaagttcaagccaagggacagaagctgccactcaagtcctcggaaag
agaaagatacaagatctggtttcacaggtagatccatttggaaagctggaacctgaagtc
gaagatcttctcttggagattgctgatgattttattgattcggtgaccacattttcatgc
aatctggcaaaacacagaaaatcttcaactttagaatccaaagatttattgctacactta
gagaagaattggcagttaaacgttcctggatattcgagtgacgagtggaagaatcgcaac
aaaaatttatcatcaagtgatactcacaagaaacgtctggacatgatacgcatactgaag
gaagcatcccgtgtcgaaacaaacgtaaatagccctaaagagatggtccgacaaggggtt
ggaatgcccattggtaccaacaacctaatgagaccttcatcaagctcagaacaactattg
tcacagacaactggttcgcagttactgcagcaaatgacgaggttctga
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integrated database retrieval system
