Cucurbita pepo subsp. pepo (vegetable marrow): 111778546
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Entry
111778546 CDS
T05351
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111778546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111778546
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111778546
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_At1g61320_AtMIF1
F-box-like
LRR_NXF1-5
LRR_8
F-box
Motif
Other DBs
NCBI-GeneID:
111778546
NCBI-ProteinID:
XP_023514209
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Position
LG17:complement(6360003..6364363)
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AA seq
584 aa
AA seq
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MLRMASTFQEDVLEHVFSFIQCHKDRNSISMVCKSWYEIERWCRKRIFVGNCYAVSPQIV
IRRFPEVRSVELKGKPHFADFSLVPDGWGGYVHPWIVAMASAYPLLEEIKLKRMVVTDES
LELISKSFKNFKVLVLMTCEGFSTDGLAAIAANCRNLKVLDLRESDVEDLSGHWLSHFPD
KYTSLVSLNIACLASEVSISALERLVDRCPNLRTLWLNRPVPLDRHPNLLRRAPQLVEFG
AGCYTADLRSDVFSNLTTAFTSCTELKSLSGFWDVVPAYLPSVYPTCSRLTSLNLSYATI
QSDDLTKLISQCHNLQKLWVLDYIEDSGLEALADTCKDLRELRVFPSEPYGPEPNVSLTE
QGLVSVSEGCPKLQSVLYFCRQMTNAALVTIARNRPNMTRFRLCIMEPRTPDYLTNQPLD
VGFGAIVEHCKDLQRFSLSGLLTDRCFEYIGNYGKKLEMLSVAFAGDTDLALHHVLSGCD
SLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSFGACKLLAQKFPKLNVEVIDER
GPPNIRPESCPVEKLYIYRSVAGCRLDMPGFVWTMDGDASPRLT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaatggcgagtacgtttcaggaggatgtgttggagcatgtgttttcgtttata
cagtgtcataaggataggaactcgatctcgatggtgtgtaagtcgtggtatgagattgag
aggtggtgtaggaagaggatttttgttgggaactgttatgcggtgagtcctcagattgta
atcaggaggtttccggaggtgagatctgtggagttgaaggggaagccgcactttgcggat
tttagtttggtgcctgatggttggggtgggtatgttcatccttggatcgtggctatggct
tctgcgtatcctttgctggaggagatcaagttgaagcgaatggtggtaacggatgagagc
ttggagctcatttccaagtcttttaagaattttaaggttcttgtgttgatgacttgtgaa
gggttcagtactgatgggcttgcggccattgctgccaattgcaggaatttgaaagtgttg
gacttacgagagagtgatgtggaagatctgagtggacattggctcagccattttcctgat
aaatatacgtcacttgtatccctcaatattgcctgtttggcgtctgaggtgagtatttct
gcattggagcgtctcgtggataggtgtccaaacttacggacactgtggctcaatcgtcct
gttccccttgataggcatcccaacctacttcgtcgcgcaccacagctagttgagtttggt
gctggatgctacacagcggacttgagatctgatgttttttcgaacttaacaacagcattc
acaagctgcacagaattgaaaagtttatctggattttgggatgtggttcctgcatacctt
ccttccgtttatcccacttgctctaggctaacatccttgaacttgagctatgcaacaatt
caaagtgacgatcttaccaagcttataagtcaatgccataatttgcagaagctttgggtg
ctggattacattgaagattctggccttgaagcccttgcagatacttgcaaggatcttcga
gaattaagagtgtttccatctgaaccatatggtccagaaccaaatgtgtccttgacagaa
cagggtcttgtctctgtttctgaaggttgcccaaagctccaatccgttctgtacttctgt
cgtcaaatgacaaatgctgccttagtgaccattgccagaaatcgaccaaacatgacacga
tttcgtctctgtattatggagccacgaactcctgattacctcacaaatcagccgcttgac
gtgggctttggtgccattgttgagcattgcaaggatctccaacgtttttccctctctggc
cttcttacagatagatgctttgagtacattgggaattatggcaagaagctagagatgcta
tctgtggcatttgctggagatactgatttagcacttcatcatgtgttgtccggatgtgat
agtcttcgcaagctggagattagggactgtcctttcggtgacaaagctcttttggcgaat
gctgcaaagctcgagacaatgcgatccctttggatgtcttcttgcttggtgagttttgga
gcatgcaaattgttagctcagaagtttcccaaacttaatgtcgaagttatagacgagagg
ggtcccccaaatataaggcccgaaagttgtcccgtggaaaaactttatatataccggagt
gttgctgggtgtcgcttagacatgcctggtttcgtgtggacaatggatggagatgcttct
ccaaggcttacttga
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