Cucurbita pepo subsp. pepo (vegetable marrow): 111778581
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Entry
111778581 CDS
T05351
Name
(RefSeq) structural maintenance of chromosomes protein 1-like isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111778581
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
111778581
Meiosis-specific proteins
Cohesin complex and associated proteins
111778581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
Laminin_II
AAA_29
AAA_21
ABC_tran
SepSecS
BST2
DUF5713
DUF948
DevR
DUF1664
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
111778581
NCBI-ProteinID:
XP_023514259
LinkDB
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Position
LG17:8651754..8665883
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AA seq
1218 aa
AA seq
DB search
MPSMISSGKIIRLELENFKSYKGHQTIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTG
QLRGAQLKDLIYAFDDREKEQKGRRAFVQLVYQIGNGSELQFTRAITSTGGSEYRIDGKI
VSWDEYNSKLRSLGILIKARNFLVFQGDVESVASKSPKELSGLLEQISGSDDFKREYEEY
EEQKAKAEENSALVYQKKKTIVMERKQKKEQKEEAEKHLRLQDQLRSLKKDHFLWQLFVI
EKDVVKLNDDLEAERRSRDDVMEQIDGFEHEALKKRKEQAKYFKEIGNCEKRIAERSNKL
DKNQPELLKLKEETSRINSKIKRSRKDLDKKMEQRRKHAQYIKELQKGIRDLNAKLEDLH
EKGRDSGEKLKLDDQELREYCRIKEEAGMKTVKLRDEKEVLDRQQHADIEAQKNLEENLQ
QLHNRENELESQEEQMRTRQRKILDSSARHKDDVADLKKDLHAMKDKHRDARNKYENLKS
KIGEIENQLRELKADRYENERDARLSQAVETLKRLFQGVHGRMTDLCRPTQKKYNLAVTV
AMGKFMDAVVVEDEQTGKECIKYLKEQRLPPQTFIPLQSVRVKPVIERLRALGGSAKLVF
DVIHFNPTLEKAIVFAVGNTLVCDDLDEAKALSWSGERYKVVTVDGIMLTKSGTMTGGTS
GGMEARSNKWDDKKIEGFKKKKEQYESELDELGSIREMQLKESEASGRISGLEKKIQYAE
IEKRSIEDKLANLRQEKEIIKEEIDRISPELQKLKNGVDKRNTDIRKLERRINEIVDRIY
RDFSKSVGVANIREYEENQLQSVQHMADERVSLSSQLTKLKCQLEYEQNRDMESQIKELE
STLTSLEHGLRKIQNKEADAKSTAENANNDIDRLKEELAEWKSRLEDCEKDMQEWKKKTS
SATTSISKLSRQINSKESNIEQLITQKQEIVEKCELENIVLPTISDPMETESLTPGPVFD
FSHLNRSYQQEKRSSDREKLEMEFKHKIDGLISEIERTAPNLKALDQYEALKEKERIISE
EFEAARKEEKEVADKFSSIKQKRYELFMDAFNHISGNIDKIYKQLTKSNTHPLGGTAYLN
LENEDEPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSFRPSPFFILDEVD
AALDNLNVAKVAGFIRSKSCEGARMNQDDDGSSGFQSIVISLKDSFYDKAEALVGVYRDC
ERSCSRTLTFDLTKYRES
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccatgatttcgtccggcaagatcattcgactggagcttgagaatttcaagtct
tacaagggtcatcagacaatcggtcctttttatgatttcacggccataattggtcccaat
ggagctgggaagtcgaaccttatggatgccataagcttcgtgcttggtgtacggactggg
caactgcgtggggcacagttgaaggacctaatctacgcttttgatgacagggaaaaggaa
cagaagggacggagggcgttcgttcagctcgtttatcagataggtaatggttcggagctc
caatttacgagagcaatcacaagcactggcggcagcgagtatcgaattgatggaaagatt
gtctcctgggatgagtataattcgaagctgaggtcacttggaatacttatcaaggctcgg
aatttcctcgttttccagggtgatgtagaatccgttgcatccaaaagtcccaaagaactc
tcgggacttcttgagcaaatctctggatctgatgatttcaagagagaatatgaagagtat
gaagagcagaaagccaaagctgaagaaaattcagcacttgtatatcagaagaaaaagact
attgtgatggaaagaaaacagaagaaagagcaaaaggaagaagctgaaaaacacctccgt
ttgcaagatcaactgagatctttgaagaaagatcacttcttgtggcaattatttgttata
gaaaaggacgtcgtgaaacttaatgatgatcttgaagctgaaaggagaagccgtgatgat
gtcatggaacaaattgatggttttgaacacgaagcattgaaaaagagaaaggaacaagct
aagtattttaaggaaattggtaactgcgagaagagaattgcagagaggagtaataagctt
gataagaatcaacccgagcttcttaaattgaaagaagaaacatctcgaataaattcaaaa
atcaagagaagtagaaaagatcttgataagaaaatggaacaaaggagaaaacacgctcaa
tatataaaggagttacaaaagggcatacgggatctcaatgcaaagctggaggatttacat
gaaaaaggccgagacagtggtgaaaaactaaagttagatgaccaagaactgagggaatat
tgtcgaatcaaggaggaagctgggatgaaaactgtaaaactaagagatgaaaaggaggta
ttagataggcaacaacatgctgatattgaagctcagaagaatttggaagaaaaccttcaa
caattacataacagggagaatgaattggagtcacaagaggagcagatgcgaacaagacag
agaaaaattcttgatagttcagctagacataaggatgatgttgcagatctgaaaaaggat
ttgcatgccatgaaagataagcatcgagatgccaggaataaatatgaaaacttaaagtcc
aaaattggagaaattgaaaaccaactgcgtgagttgaaggctgatagatatgaaaatgaa
agagatgccagattatctcaagctgttgaaacattgaaacggctgtttcaaggagttcat
ggtcgtatgactgatctttgccgtccaacacaaaagaagtacaacctggctgttactgtt
gcaatgggtaaatttatggatgcagtggttgttgaggatgaacagacgggaaaagaatgt
attaagtatttgaaagaacaaaggcttcctcctcagacattcatacctcttcagtctgtt
cgtgtaaagcccgtcattgagagactgcgtgctttaggtggtagtgcaaagttggtcttt
gatgttatccattttaatccgacattggagaaggcaattgtttttgctgtgggaaatact
ctagtttgtgacgacctcgatgaagccaaggctctgagctggagcggagaaagatataaa
gtcgtaactgttgatggaattatgcttacgaaatctggcacaatgactgggggtaccagt
ggtggcatggaagcgaggtcaaacaaatgggacgataaaaagattgaagggtttaagaaa
aagaaagaacagtatgaatcagagctagatgaacttggatcaatcagagagatgcaacta
aaggaatctgaagcatctgggaggattagtggacttgagaaaaagattcagtatgcagag
attgagaagcgaagtattgaagacaaacttgcaaacttgaggcaagagaaagaaattata
aaagaagaaattgatcgaataagtccggaacttcagaagttgaagaatggggttgataag
aggaacacagacattaggaagttggagaggaggatcaatgaaattgttgaccggatatat
cgagacttcagtaaatctgttggggtggccaacatacgagaatacgaagaaaaccaactt
caatctgtgcagcatatggccgacgaacgtgttagcttgagcagtcagctgacaaaattg
aaatgccagttggagtatgaacagaatcgagacatggaatcacaaattaaagaactagaa
tctactttgacttctttggagcatggtttaagaaagattcaaaacaaagaagctgatgcc
aaatcaaccgccgaaaatgccaataatgatatcgatcgcttgaaggaggaactggctgag
tggaagtcgaggttggaagactgtgagaaggatatgcaggaatggaagaagaaaacatct
tctgctacaactagcatatcgaaactgagtcgtcagattaattctaaggagagcaacatt
gaacagctgatcacacagaagcaggaaatagtggaaaaatgtgaattggaaaatatagtt
ctccccactatctcagaccccatggagactgaatccttgacgcctggccctgtttttgat
tttagccacctcaatagatcctatcaacaggagaagagatcatctgatagagagaaactt
gagatggagtttaaacataagatagatggcttgatatctgaaattgaaagaactgcacca
aatttgaaagcactagatcaatatgaggctttgaaagagaaggaaagaataatatctgag
gagtttgaagcagctaggaaagaggagaaagaggtggctgataaattcagctctattaag
caaaaaaggtacgagttgtttatggatgctttcaaccatatttctggaaacattgataag
atttataagcaattgacaaaaagtaatacacatcccttgggtggaacggcatatttgaac
ttggaaaatgaggatgaaccatttttacatggcatcaagtatactgctatgcctccaacg
aagcggtttcgtgatatggaacaattatctggtggagaaaagactgttgcagcgctagca
ttgcttttttccattcatagttttaggccttcgccctttttcattttggatgaagtggat
gctgccttagataacttgaacgttgcaaaggtcgctggtttcattcgatcgaagtcatgt
gaaggtgccaggatgaatcaggacgacgacggaagtagtggttttcaaagtattgttata
tcactgaaggatagcttttacgacaaagccgaagctttagtcggggtttaccgggattgc
gagagaagctgctcgagaacgttgaccttcgaccttaccaaatatcgagaatcatag
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